Difference between revisions of "Ec-20 000990"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-1803 RXN3O-1803] == * direction: ** LEFT-TO-RIGHT * common name: ** Thiolase-like, subgroup *...")
(Created page with "Category:Gene == Gene Ec-20_000990 == * left end position: ** 978922 * transcription direction: ** POSITIVE * right end position: ** 992732 * centisome position: ** 18.984...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-1803 RXN3O-1803] ==
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== Gene Ec-20_000990 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 978922
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* common name:
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* transcription direction:
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** Thiolase-like, subgroup
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** POSITIVE
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** Beta-ketoacyl synthase, N-terminal
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* right end position:
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** beta-ketoacyl synthase, partial
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** 992732
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** 3-oxoacyl-[acyl-carrier-protein] synthase
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* centisome position:
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* ec number:
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** 18.984526   
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
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* Synonym(s):
 
* Synonym(s):
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** Esi_0195_0040
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** Esi0195_0040
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.6.4.4-RXN]]
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** 1 [[Palmitoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[3-oxo-stearoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* With common name(s):
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** 1 a palmitoyl-[acp][c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 a 3-oxo-stearoyl-[acp][c] '''+''' 1 CO2[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-27_003480]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-27_002090]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-12_000650]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-12_000640]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[PWY3O-355]], stearate biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=978922}}
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{{#set: common name=Thiolase-like, subgroup}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
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{{#set: right end position=992732}}
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{{#set: common name=beta-ketoacyl synthase, partial}}
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{{#set: centisome position=18.984526    }}
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{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
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{{#set: common name=Esi_0195_0040|Esi0195_0040}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: reaction associated=3.6.4.4-RXN}}
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{{#set: ec number=EC-2.3.1.41}}
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{{#set: gene associated=Ec-27_003480|Ec-27_002090|Ec-12_000650|Ec-12_000640}}
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{{#set: in pathway=PWY3O-355}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:21, 21 March 2018

Gene Ec-20_000990

  • left end position:
    • 978922
  • transcription direction:
    • POSITIVE
  • right end position:
    • 992732
  • centisome position:
    • 18.984526
  • Synonym(s):
    • Esi_0195_0040
    • Esi0195_0040

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-20_000990&oldid=26366"