Difference between revisions of "Ec-21 005990"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=XMPXAN-RXN XMPXAN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 5'-nucleotidase * ec numb...")
(Created page with "Category:Gene == Gene Ec-21_005990 == * left end position: ** 6904711 * transcription direction: ** POSITIVE * right end position: ** 6909777 * centisome position: ** 93.5...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=XMPXAN-RXN XMPXAN-RXN] ==
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== Gene Ec-21_005990 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 6904711
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* common name:
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* transcription direction:
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** 5'-nucleotidase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
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** 6909777
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* centisome position:
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** 93.558266   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0014_0136
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** Esi0014_0136
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ACID-PHOSPHATASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[XANTHOSINE]][c]
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* With common name(s):
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** 1 H2O[c] '''+''' 1 XMP[c] '''=>''' 1 phosphate[c] '''+''' 1 xanthosine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-05_000950]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-15_000820]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-12_005060]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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*** Assignment: go-term
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== Pathways  ==
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* Reaction: [[RXN-5822]]
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* [[PWY-5695]], urate biosynthesis/inosine 5'-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5695 PWY-5695]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596]
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** '''6''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-6348]]
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* [[PWY-5083]]
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* [[NADPHOS-DEPHOS-PWY]]
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* [[NAD-BIOSYNTHESIS-II]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=6904711}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28530 28530]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=6909777}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02719 R02719]
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{{#set: centisome position=93.558266    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0014_0136|Esi0014_0136}}
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{{#set: common name=5'-nucleotidase}}
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{{#set: reaction associated=ACID-PHOSPHATASE-RXN|RXN-5822}}
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{{#set: ec number=EC-3.1.3.5}}
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{{#set: pathway associated=PWY-6348|PWY-5083|NADPHOS-DEPHOS-PWY|NAD-BIOSYNTHESIS-II}}
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{{#set: gene associated=Ec-05_000950|Ec-15_000820|Ec-12_005060}}
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{{#set: in pathway=PWY-5695|PWY-6596}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:23, 21 March 2018

Gene Ec-21_005990

  • left end position:
    • 6904711
  • transcription direction:
    • POSITIVE
  • right end position:
    • 6909777
  • centisome position:
    • 93.558266
  • Synonym(s):
    • Esi_0014_0136
    • Esi0014_0136

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-21_005990&oldid=26513"