Difference between revisions of "Ec-18 002860"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11519 RXN-11519] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
(Created page with "Category:Gene == Gene Ec-18_002860 == * left end position: ** 2839635 * transcription direction: ** POSITIVE * right end position: ** 2847056 * centisome position: ** 57.6...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11519 RXN-11519] ==
+
== Gene Ec-18_002860 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 2839635
 +
* transcription direction:
 +
** POSITIVE
 +
* right end position:
 +
** 2847056
 +
* centisome position:
 +
** 57.639343   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0139_0050
 +
** Esi0139_0050
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[L-IDITOL-2-DEHYDROGENASE-RXN]]
−
** 1 [[WATER]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[3-7-DIMETHYLXANTHINE]][c] '''=>''' 1 [[CPD-12482]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 H2O[c] '''+''' 1 oxygen[c] '''+''' 1 theobromine[c] '''=>''' 1 3,7-dimethylurate[c] '''+''' 1 hydrogen peroxide[c]
+
* Reaction: [[RXN-1102]]
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* Gene: [[Ec-20_000230]]
+
−
** Source: [[orthology-aragem]]
+
−
* Gene: [[Ec-20_000210]]
+
 
** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
−
== Pathways  ==
+
* Reaction: [[RXN-1125]]
−
* [[PWY-6632]], caffeine degradation IV (bacteria, via demethylation and oxidation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6632 PWY-6632]
+
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
 
** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
−
*** Tool: [[pantograph]]
+
* Reaction: [[RXN-7644]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: ec-number
 +
== Pathways associated ==
 +
* [[PWY-361]]
 +
* [[PWY-4101]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: left end position=2839635}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R07978 R07978]
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=2847056}}
−
{{#set: gene associated=Ec-20_000230|Ec-20_000210}}
+
{{#set: centisome position=57.639343    }}
−
{{#set: in pathway=PWY-6632}}
+
{{#set: common name=Esi_0139_0050|Esi0139_0050}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reaction associated=L-IDITOL-2-DEHYDROGENASE-RXN|RXN-1102|RXN-1125|RXN-7644}}
−
{{#set: reconstruction source=orthology-aragem}}
+
{{#set: pathway associated=PWY-361|PWY-4101}}
−
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 19:23, 21 March 2018

Gene Ec-18_002860

  • left end position:
    • 2839635
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2847056
  • centisome position:
    • 57.639343
  • Synonym(s):
    • Esi_0139_0050
    • Esi0139_0050

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-18_002860&oldid=26615"