Difference between revisions of "RXN-4209"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13617 RXN-13617] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4209 RXN-4209] == * direction: ** LEFT-TO-RIGHT * common name: ** Fatty acid hydroxylase * ec n...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4209 RXN-4209] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| + | * common name: | ||
| + | ** Fatty acid hydroxylase | ||
* ec number: | * ec number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/1.14.19.20 EC-1.14.19.20] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 2 [[PROTON]][c] '''+''' 1 [[CPD-4125]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 2 [[WATER]][c] '''+''' 1 [[CPD-4126]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 2 H+[c] '''+''' 1 avenasterol[c] '''+''' 2 a ferrocytochrome b5[c] '''+''' 1 oxygen[c] '''=>''' 2 H2O[c] '''+''' 1 5-dehydroavenasterol[c] '''+''' 2 a ferricytochrome b5[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[Ec- | + | * Gene: [[Ec-01_003780]] |
| + | ** Source: [[annotation-esiliculosus_genome]] | ||
| + | *** Assignment: EC-NUMBER | ||
** Source: [[orthology-aragem]] | ** Source: [[orthology-aragem]] | ||
== Pathways == | == Pathways == | ||
| − | * [[PWY- | + | * [[PWY-2541]], plant sterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541] |
| − | ** ''' | + | ** '''10''' reactions found over '''36''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
** Source: [[orthology-aragem]] | ** Source: [[orthology-aragem]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-esiliculosus_genome]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | |||
| − | |||
* LIGAND-RXN: | * LIGAND-RXN: | ||
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R07486 R07486] |
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: ec number=EC- | + | {{#set: common name=Fatty acid hydroxylase}} |
| − | {{#set: gene associated=Ec- | + | {{#set: ec number=EC-1.14.19.20}} |
| − | {{#set: in pathway=PWY- | + | {{#set: gene associated=Ec-01_003780}} |
| − | {{#set: reconstruction category=orthology}} | + | {{#set: in pathway=PWY-2541}} |
| − | {{#set: reconstruction source=orthology-aragem}} | + | {{#set: reconstruction category=orthology|annotation}} |
| − | {{#set: reconstruction tool=pantograph}} | + | {{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}} |
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 19:30, 21 March 2018
Contents
Reaction RXN-4209
- direction:
- LEFT-TO-RIGHT
- common name:
- Fatty acid hydroxylase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 2 PROTON[c] + 1 CPD-4125[c] + 2 FERROCYTOCHROME-B5[c] + 1 OXYGEN-MOLECULE[c] => 2 WATER[c] + 1 CPD-4126[c] + 2 FERRICYTOCHROME-B5[c]
- With common name(s):
- 2 H+[c] + 1 avenasterol[c] + 2 a ferrocytochrome b5[c] + 1 oxygen[c] => 2 H2O[c] + 1 5-dehydroavenasterol[c] + 2 a ferricytochrome b5[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Ec-01_003780
- Source: annotation-esiliculosus_genome
- Assignment: EC-NUMBER
- Source: orthology-aragem
- Source: annotation-esiliculosus_genome
Pathways
- PWY-2541, plant sterol biosynthesis: PWY-2541
- 10 reactions found over 36 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-aragem
- Tool: pantograph
- Source: orthology-aragem
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
External links
- LIGAND-RXN:
