Difference between revisions of "RXN1G-1438"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3221 PWY-3221] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-33...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-1438 RXN1G-1438] == * direction: ** LEFT-TO-RIGHT * common name: ** Trehalose 6-phosphate syn...")
 
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3221 PWY-3221] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-1438 RXN1G-1438] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-3398]
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** dTDP-L-rhamnose biosynthesis II
+
** Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase
 +
** HAD-like domain
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.1.3.12 EC-3.1.3.12]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''1''' reactions found over '''3''' reactions in the full pathway
+
* With identifiers:
−
* [[DTDPGLUCDEHYDRAT-RXN]]
+
** 1 [[CPD1G-773]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[CPD1G-1353]][c]
−
** 2 associated gene(s):
+
* With common name(s):
−
*** [[Ec-27_005770]]
+
** 1 6-O-cis-keto-mycolyl-trehalose 6-phosphate[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 trehalose-cis-keto-mono-mycolate[c]
−
*** [[Ec-01_007350]]
+
 
−
** 2 reconstruction source(s) associated:
+
== Genes associated with this reaction  ==
−
*** [[annotation-esiliculosus_genome]]
+
Genes have been associated with this reaction based on different elements listed below.
−
*** [[orthology-aragem]]
+
* Gene: [[Ec-06_003140]]
−
== Reaction(s) not found ==
+
** Source: [[annotation-esiliculosus_genome]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=DTDPGLUCOSEPP-RXN DTDPGLUCOSEPP-RXN]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5461 RXN-5461]
+
* Gene: [[Ec-19_005250]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-20_003980]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-11_002540]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-24_004390]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-08_005270]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-05_002680]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-22_003320]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
 +
** '''30''' reactions found over '''182''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* ARACYC:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-3221 PWY-3221]
+
{{#set: common name=Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase}}
−
{{#set: taxonomic range=TAX-3398}}
+
{{#set: common name=HAD-like domain}}
−
{{#set: common name=dTDP-L-rhamnose biosynthesis II}}
+
{{#set: ec number=EC-3.1.3.12}}
−
{{#set: reaction found=1}}
+
{{#set: gene associated=Ec-06_003140|Ec-19_005250|Ec-20_003980|Ec-11_002540|Ec-24_004390|Ec-08_005270|Ec-05_002680|Ec-22_003320}}
−
{{#set: total reaction=3}}
+
{{#set: in pathway=PWYG-321}}
−
{{#set: completion rate=33.0}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:31, 21 March 2018

Reaction RXN1G-1438

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase
    • HAD-like domain
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 6-O-cis-keto-mycolyl-trehalose 6-phosphate[c] + 1 H2O[c] => 1 phosphate[c] + 1 trehalose-cis-keto-mono-mycolate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWYG-321, mycolate biosynthesis: PWYG-321
    • 30 reactions found over 182 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN1G-1438&oldid=27477"