Difference between revisions of "CPD-12905"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LINOLENOYL-RXN LINOLENOYL-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** long chain acyl-c...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12905 CPD-12905] == * smiles: ** CC(C)=CC(O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LINOLENOYL-RXN LINOLENOYL-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12905 CPD-12905] ==
* direction:
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* smiles:
** LEFT-TO-RIGHT
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** CC(C)=CC(O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
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* inchi key:
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** InChIKey=OLZYNLSKRKFUJC-FPVIQYCMSA-J
 
* common name:
 
* common name:
** long chain acyl-coA synthetase
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** 3-hydroxy-5-methylhex-4-enoyl-CoA
** long chain acyl-CoA synthetase
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* molecular weight:
* ec number:
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** 889.657   
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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== Reaction(s) known to produce the compound ==
** 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[LINOLENIC_ACID]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[LINOLENOYL-COA]][c] '''+''' 1 [[PPI]][c]
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* [[RXN-11919]]
* With common name(s):
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== Reaction(s) of unknown directionality ==
** 1 coenzyme A[c] '''+''' 1 ATP[c] '''+''' 1 α-linolenate[c] '''=>''' 1 AMP[c] '''+''' 1 α-linolenoyl-CoA[c] '''+''' 1 diphosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-02_006430]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-12_008720]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-01_001560]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-03_003710]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-7049]], icosapentaenoate biosynthesis II (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7049 PWY-7049]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7724]], icosapentaenoate biosynthesis III (8-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7724 PWY-7724]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
{{#set: common name=long chain acyl-coA synthetase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=50986102 50986102]
{{#set: common name=long chain acyl-CoA synthetase}}
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* LIGAND-CPD:
{{#set: ec number=EC-6.2.1.3}}
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** [http://www.genome.jp/dbget-bin/www_bget?C16469 C16469]
{{#set: gene associated=Ec-02_006430|Ec-12_008720|Ec-01_001560|Ec-03_003710}}
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* HMDB : HMDB60373
{{#set: in pathway=PWY-7049|PWY-7724}}
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{{#set: smiles=CC(C)=CC(O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
{{#set: reconstruction category=annotation}}
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{{#set: inchi key=InChIKey=OLZYNLSKRKFUJC-FPVIQYCMSA-J}}
{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: common name=3-hydroxy-5-methylhex-4-enoyl-CoA}}
{{#set: reconstruction tool=pathwaytools}}
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{{#set: molecular weight=889.657    }}
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{{#set: produced by=RXN-11919}}

Latest revision as of 19:33, 21 March 2018

Metabolite CPD-12905

  • smiles:
    • CC(C)=CC(O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
  • inchi key:
    • InChIKey=OLZYNLSKRKFUJC-FPVIQYCMSA-J
  • common name:
    • 3-hydroxy-5-methylhex-4-enoyl-CoA
  • molecular weight:
    • 889.657
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC(C)=CC(O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-" cannot be used as a page name in this wiki.