Difference between revisions of "RXN-17797"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10039 RXN-10039] == * direction: ** LEFT-TO-RIGHT * common name: ** O-phosphoseryl-tRNA(Sec) se...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17797 RXN-17797] == * direction: ** LEFT-TO-RIGHT * common name: ** 6-phosphogluconate dehydrog...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10039 RXN-10039] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17797 RXN-17797] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** O-phosphoseryl-tRNA(Sec) selenium transferase
+
** 6-phosphogluconate dehydrogenase, C-terminal-like
 +
** 3-hydroxyacyl-CoA dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.9.1.2 EC-2.9.1.2]
+
** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[SEPO3]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[O-phospho-L-seryl-tRNASecs]][c] '''=>''' 2 [[Pi]][c] '''+''' 1 [[Charged-SEC-tRNAs]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[CPD-19150]][c] '''=>''' 1 [[CPD-19151]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 selenophosphate[c] '''+''' 1 H2O[c] '''+''' 1 an O-phospho-L-seryl-[tRNASec][c] '''=>''' 2 phosphate[c] '''+''' 1 an L-selenocysteinyl-[tRNAsec][c]
+
** 1 H2O[c] '''+''' 1 (2E,5Z)-dodecenoyl-CoA[c] '''=>''' 1 (S)-3-hydroxy-(5Z)-dodecenoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-14_006440]]
+
* Gene: [[Ec-14_006530]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: AUTOMATED-NAME-MATCH
+
*** Assignment: GO-TERM
 +
* Gene: [[Ec-19_005290]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6281]], L-selenocysteine biosynthesis II (archaea and eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6281 PWY-6281]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R08224 R08224]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=O-phosphoseryl-tRNA(Sec) selenium transferase}}
+
{{#set: common name=6-phosphogluconate dehydrogenase, C-terminal-like}}
−
{{#set: ec number=EC-2.9.1.2}}
+
{{#set: common name=3-hydroxyacyl-CoA dehydrogenase}}
−
{{#set: gene associated=Ec-14_006440}}
+
{{#set: ec number=EC-1.1.1.35}}
−
{{#set: in pathway=PWY-6281}}
+
{{#set: gene associated=Ec-14_006530|Ec-19_005290}}
 +
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:33, 21 March 2018

Reaction RXN-17797

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 6-phosphogluconate dehydrogenase, C-terminal-like
    • 3-hydroxyacyl-CoA dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 (2E,5Z)-dodecenoyl-CoA[c] => 1 (S)-3-hydroxy-(5Z)-dodecenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-17797&oldid=27724"