Difference between revisions of "P42-PWY"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P162-PWY P162-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-12...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-22...")
 
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P162-PWY P162-PWY] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-224756]
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-32066 TAX-32066]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183939 TAX-183939]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183925 TAX-183925]
 
* common name:
 
* common name:
−
** L-glutamate degradation V (via hydroxyglutarate)
+
** incomplete reductive TCA cycle
 
* Synonym(s):
 
* Synonym(s):
−
** L-glutamate fermentation
+
** citric acid cycle variant
 +
** tricarboxylic acid cycle variant
 +
** TCA cycle variation I
 +
** incomplete reductive tricarboxylic acid cycle
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''4''' reactions found over '''11''' reactions in the full pathway
+
  '''5''' reactions found over '''7''' reactions in the full pathway
−
* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
+
* [[FUMHYDR-RXN]]
−
** 3 associated gene(s):
+
** 2 associated gene(s):
−
*** [[Ec-26_003940]]
+
*** [[Ec-25_001360]]
−
*** [[Ec-24_000870]]
+
*** [[Ec-23_003460]]
−
*** [[Ec-22_002850]]
+
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
 
*** [[orthology-aragem]]
 
*** [[orthology-aragem]]
−
* [[GLUTAMATE-DEHYDROGENASE-RXN]]
+
* [[MALATE-DEH-RXN]]
−
** 3 associated gene(s):
+
** 2 associated gene(s):
−
*** [[Ec-12_008040]]
+
*** [[Ec-10_006200]]
−
*** [[Ec-06_008240]]
+
*** [[Ec-02_003100]]
−
*** [[Ec-06_001980]]
+
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
 
*** [[orthology-aragem]]
 
*** [[orthology-aragem]]
−
* [[RXN-11662]]
+
* [[PYRUFLAVREDUCT-RXN]]
−
** 2 associated gene(s):
+
** 3 associated gene(s):
−
*** [[Ec-19_005290]]
+
*** [[Ec-18_003420]]
−
*** [[Ec-14_006530]]
+
*** [[Ec-15_004230]]
−
** 2 reconstruction source(s) associated:
+
*** [[Ec-23_002710]]
 +
** 1 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
−
*** [[orthology-aragem]]
+
* [[PYRUVATE-CARBOXYLASE-RXN]]
−
* [[RXN-11667]]
+
** 1 associated gene(s):
 +
*** [[Ec-03_001890]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
* [[SUCCCOASYN-RXN]]
 
** 2 associated gene(s):
 
** 2 associated gene(s):
−
*** [[Ec-17_000320]]
+
*** [[Ec-10_000030]]
−
*** [[Ec-14_006530]]
+
*** [[Ec-02_001020]]
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
 
*** [[orthology-aragem]]
 
*** [[orthology-aragem]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=ACETATE--COA-LIGASE-ADP-FORMING-RXN ACETATE--COA-LIGASE-ADP-FORMING-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=2-OXOGLUTARATE-SYNTHASE-RXN 2-OXOGLUTARATE-SYNTHASE-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=BUTYRYL-COA-DEHYDROGENASE-RXN BUTYRYL-COA-DEHYDROGENASE-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=GLUTACONYL-COA-DECARBOXYLASE-RXN GLUTACONYL-COA-DECARBOXYLASE-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=KETOGLUTREDUCT-RXN KETOGLUTREDUCT-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=R11-RXN R11-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1082 RXN-1082]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1083 RXN-1083]
+
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-1239}}
+
{{#set: taxonomic range=TAX-224756}}
−
{{#set: taxonomic range=TAX-32066}}
+
{{#set: taxonomic range=TAX-183939}}
−
{{#set: common name=L-glutamate degradation V (via hydroxyglutarate)}}
+
{{#set: taxonomic range=TAX-183925}}
−
{{#set: common name=L-glutamate fermentation}}
+
{{#set: common name=incomplete reductive TCA cycle}}
−
{{#set: reaction found=4}}
+
{{#set: common name=citric acid cycle variant|tricarboxylic acid cycle variant|TCA cycle variation I|incomplete reductive tricarboxylic acid cycle}}
−
{{#set: total reaction=11}}
+
{{#set: reaction found=5}}
−
{{#set: completion rate=36.0}}
+
{{#set: total reaction=7}}
 +
{{#set: completion rate=71.0}}

Latest revision as of 19:33, 21 March 2018

Pathway P42-PWY

  • taxonomic range:
  • common name:
    • incomplete reductive TCA cycle
  • Synonym(s):
    • citric acid cycle variant
    • tricarboxylic acid cycle variant
    • TCA cycle variation I
    • incomplete reductive tricarboxylic acid cycle

Reaction(s) found

5 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=P42-PWY&oldid=27767"