Difference between revisions of "RXN-5463"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5395 RXN0-5395] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycoside hydrolase, cataly...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5463 RXN-5463] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5395 RXN0-5395] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5463 RXN-5463] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* common name:
 
** Glycoside hydrolase, catalytic domain
 
** Glycoside hydrolase/deacetylase, beta/alpha-barrel
 
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/3.2.1 EC-3.2.1]
+
** [http://enzyme.expasy.org/EC/2.4.1.257 EC-2.4.1.257]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[WATER]][c] '''+''' 1 [[3-BETA-D-GLUCOSYLGLUCOSE]][c] '''=>''' 2 [[Glucopyranose]][c]
+
** 1 [[GDP-MANNOSE]][c] '''+''' 1 [[CPD-5161]][c] '''=>''' 1 [[CPD-5162]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[GDP]][c]
 
* With common name(s):
 
* With common name(s):
** 1 H2O[c] '''+''' 1 nigerose[c] '''=>''' 2 D-glucopyranose[c]
+
** 1 GDP-α-D-mannose[c] '''+''' 1 a (mannosyl)2-(N-acetylglucosaminyl)2-diphosphodolichol[c] '''=>''' 1 a (mannosyl)3-(N-acetylglucosaminyl)2-diphosphodolichol[c] '''+''' 1 H+[c] '''+''' 1 GDP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* Gene: [[Ec-19_000430]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Assignment: AUTOMATED-NAME-MATCH
 
* Gene: [[Ec-08_004650]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Assignment: AUTOMATED-NAME-MATCH
 
* Gene: [[Ec-23_003530]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Assignment: AUTOMATED-NAME-MATCH
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
 +
** '''19''' reactions found over '''19''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29522 29522]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R06238 R06238]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Glycoside hydrolase, catalytic domain}}
+
{{#set: ec number=EC-2.4.1.257}}
{{#set: common name=Glycoside hydrolase/deacetylase, beta/alpha-barrel}}
+
{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
{{#set: ec number=EC-3.2.1}}
+
{{#set: gene associated=Ec-19_000430|Ec-08_004650|Ec-23_003530}}
+
{{#set: in pathway=}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:34, 21 March 2018

Reaction RXN-5463

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 GDP-α-D-mannose[c] + 1 a (mannosyl)2-(N-acetylglucosaminyl)2-diphosphodolichol[c] => 1 a (mannosyl)3-(N-acetylglucosaminyl)2-diphosphodolichol[c] + 1 H+[c] + 1 GDP[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links