Difference between revisions of "PWY-7237"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8036 RXN-8036] == * direction: ** LEFT-TO-RIGHT * common name: ** Beta-glucosidase, family GH1...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7237 PWY-7237] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8036 RXN-8036] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7237 PWY-7237] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
** Beta-glucosidase, family GH1
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** myo-, chiro- and scillo-inositol degradation
** Beta-glucosidase, family GH3
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** Beta-glucosidase, family GH30
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* ec number:
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** [http://enzyme.expasy.org/EC/3.2.1.21 EC-3.2.1.21]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''2''' reactions found over '''6''' reactions in the full pathway
** 1 [[WATER]][c] '''+''' 1 [[CPD-7417]][c] '''=>''' 1 [[Glucopyranose]][c] '''+''' 1 [[CPD-7418]][c]
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* [[MYO-INOSITOL-2-DEHYDROGENASE-RXN]]
* With common name(s):
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** 3 associated gene(s):
** 1 H2O[c] '''+''' 1 cis-coumarinic acid-β-D-glucoside[c] '''=>''' 1 D-glucopyranose[c] '''+''' 1 coumarinate[c]
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*** [[Ec-07_006540]]
 
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*** [[Ec-01_006070]]
== Genes associated with this reaction  ==
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*** [[Ec-18_003270]]
Genes have been associated with this reaction based on different elements listed below.
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** 1 reconstruction source(s) associated:
* Gene: [[Ec-07_001850]]
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*** [[annotation-esiliculosus_genome]]
** Source: [[annotation-esiliculosus_genome]]
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* [[P562-PWY]]
*** Assignment: EC-NUMBER
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** 0 associated gene:
* Gene: [[Ec-07_005240]]
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== Reaction(s) not found ==
** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13779 RXN-13779]
*** Assignment: EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14148 RXN-14148]
** Source: [[orthology-aragem]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14178 RXN-14178]
* Gene: [[Ec-20_004800]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-26_002410]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-04_002190]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-5176]], coumarin biosynthesis (via 2-coumarate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5176 PWY-5176]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: taxonomic range=TAX-2}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31223 31223]
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{{#set: common name=myo-, chiro- and scillo-inositol degradation}}
* LIGAND-RXN:
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{{#set: reaction found=2}}
** [http://www.genome.jp/dbget-bin/www_bget?R04998 R04998]
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{{#set: total reaction=6}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=33.0}}
{{#set: common name=Beta-glucosidase, family GH1}}
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{{#set: common name=Beta-glucosidase, family GH3}}
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{{#set: common name=Beta-glucosidase, family GH30}}
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{{#set: ec number=EC-3.2.1.21}}
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{{#set: gene associated=Ec-07_001850|Ec-07_005240|Ec-20_004800|Ec-26_002410|Ec-04_002190}}
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{{#set: in pathway=PWY-5176}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:35, 21 March 2018

Pathway PWY-7237

  • taxonomic range:
  • common name:
    • myo-, chiro- and scillo-inositol degradation
  • Synonym(s):

Reaction(s) found

2 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links