Difference between revisions of "PWY-5390"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12270 RXN-12270] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycosyl hydrolase, family...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5390 PWY-5390] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-33...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12270 RXN-12270] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5390 PWY-5390] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-3398]
 
* common name:
 
* common name:
** Glycosyl hydrolase, family 88
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** rutin biosynthesis
* ec number:
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** [http://enzyme.expasy.org/EC/3.2.1.179 EC-3.2.1.179]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''2''' reactions found over '''3''' reactions in the full pathway
** 1 [[WATER]][c] '''+''' 1 [[CPD-13187]][c] '''=>''' 1 [[CPD-13122]][c] '''+''' 1 [[CPD-13188]][c]
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* [[RXN-527]]
* With common name(s):
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** 3 associated gene(s):
** 1 H2O[c] '''+''' 1 unsaturated gellan tetrasaccharide[c] '''=>''' 1 4-deoxy-L-threo-hex-4-enopyranuronate[c] '''+''' 1 β-D-Glcp-(1→4)-α-L-Rhap-(1→3)-β-D-Glcp[c]
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*** [[Ec-08_003510]]
 
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*** [[Ec-19_002760]]
== Genes associated with this reaction  ==
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*** [[Ec-19_002750]]
Genes have been associated with this reaction based on different elements listed below.
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** 1 reconstruction source(s) associated:
* Gene: [[Ec-02_002980]]
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*** [[orthology-aragem]]
** Source: [[annotation-esiliculosus_genome]]
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* [[RXN1F-462]]
*** Assignment: AUTOMATED-NAME-MATCH
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** 2 associated gene(s):
* Gene: [[Ec-02_002970]]
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*** [[Ec-14_000870]]
** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-04_004610]]
*** Assignment: AUTOMATED-NAME-MATCH
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** 1 reconstruction source(s) associated:
== Pathways  ==
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*** [[orthology-aragem]]
* [[PWY-6827]], gellan degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6827 PWY-6827]
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== Reaction(s) not found ==
** '''1''' reactions found over '''2''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8449 RXN-8449]
== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: taxonomic range=TAX-3398}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31638 31638]
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{{#set: common name=rutin biosynthesis}}
* LIGAND-RXN:
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{{#set: reaction found=2}}
** [http://www.genome.jp/dbget-bin/www_bget?R09831 R09831]
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{{#set: total reaction=3}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=67.0}}
{{#set: common name=Glycosyl hydrolase, family 88}}
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{{#set: ec number=EC-3.2.1.179}}
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{{#set: gene associated=Ec-02_002980|Ec-02_002970}}
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{{#set: in pathway=PWY-6827}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:35, 21 March 2018

Pathway PWY-5390

  • taxonomic range:
  • common name:
    • rutin biosynthesis
  • Synonym(s):

Reaction(s) found

2 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links