Difference between revisions of "RXN-7913"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Ec-11_006230 == * left end position: ** 6182280 * transcription direction: ** NEGATIVE * right end position: ** 6187237 * centisome position: ** 98.2...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7913 RXN-7913] == * direction: ** LEFT-TO-RIGHT * common name: ** Adenylate kinase/UMP-CMP kina...")
 
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Ec-11_006230 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7913 RXN-7913] ==
−
* left end position:
+
* direction:
−
** 6182280
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** NEGATIVE
+
** Adenylate kinase/UMP-CMP kinase
−
* right end position:
+
** cytidylate kinase
−
** 6187237
+
* ec number:
−
* centisome position:
+
** [http://enzyme.expasy.org/EC/2.7.4.25 EC-2.7.4.25]
−
** 98.292786   
+
** [http://enzyme.expasy.org/EC/2.7.4.14 EC-2.7.4.14]
 +
** [http://enzyme.expasy.org/EC/2.7.4.13 EC-2.7.4.13]
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0031_0150
 
−
** Esi0031_0150
 
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* Reaction: [[PANTOTHENATE-KIN-RXN]]
+
* With identifiers:
 +
** 1 [[DCMP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[DCDP]][c] '''+''' 1 [[ADP]][c]
 +
* With common name(s):
 +
** 1 dCMP[c] '''+''' 1 ATP[c] '''=>''' 1 dCDP[c] '''+''' 1 ADP[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-14_004920]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-16_005090]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-06_003080]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-07_003680]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
* [[PWY-7197]], pyrimidine deoxyribonucleotide phosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7197 PWY-7197]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: go-term
+
*** Tool: [[pathwaytools]]
−
== Pathways associated ==
+
−
* [[PANTO-PWY]]
+
−
* [[PWY-3961]]
+
−
* [[COA-PWY-1]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=6182280}}
+
* RHEA:
−
{{#set: transcription direction=NEGATIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25094 25094]
−
{{#set: right end position=6187237}}
+
* LIGAND-RXN:
−
{{#set: centisome position=98.292786    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01665 R01665]
−
{{#set: common name=Esi_0031_0150|Esi0031_0150}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: reaction associated=PANTOTHENATE-KIN-RXN}}
+
{{#set: common name=Adenylate kinase/UMP-CMP kinase}}
−
{{#set: pathway associated=PANTO-PWY|PWY-3961|COA-PWY-1}}
+
{{#set: common name=cytidylate kinase}}
 +
{{#set: ec number=EC-2.7.4.25}}
 +
{{#set: ec number=EC-2.7.4.14}}
 +
{{#set: ec number=EC-2.7.4.13}}
 +
{{#set: gene associated=Ec-14_004920|Ec-16_005090|Ec-06_003080|Ec-07_003680}}
 +
{{#set: in pathway=PWY-7197}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:38, 21 March 2018

Reaction RXN-7913

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 dCMP[c] + 1 ATP[c] => 1 dCDP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7197, pyrimidine deoxyribonucleotide phosphorylation: PWY-7197
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-7913&oldid=28346"