Difference between revisions of "Ec-03 004720"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16135 RXN-16135] == * direction: ** LEFT-TO-RIGHT * common name: ** ClpP/crotonase-like domain...")
(Created page with "Category:Gene == Gene Ec-03_004720 == * left end position: ** 5529917 * transcription direction: ** POSITIVE * right end position: ** 5534363 * centisome position: ** 84.7...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16135 RXN-16135] ==
+
== Gene Ec-03_004720 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 5529917
−
* common name:
+
* transcription direction:
−
** ClpP/crotonase-like domain
+
** POSITIVE
−
** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
+
* right end position:
−
** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
+
** 5534363
−
* ec number:
+
* centisome position:
−
** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
+
** 84.70216   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0050_0038
 +
** Esi0050_0038
 +
** HIS4
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[PRIBFAICARPISOM-RXN]]
−
** 1 [[WATER]][c] '''+''' 1 [[CPD-17386]][c] '''=>''' 1 [[CPD-17387]][c]
+
−
* With common name(s):
+
−
** 1 H2O[c] '''+''' 1 (2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA[c] '''=>''' 1 (3S)-hydroxy-(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* Gene: [[Ec-16_003560]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Ec-14_006530]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: AUTOMATED-NAME-MATCH
+
−
* Gene: [[Ec-06_001380]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Ec-16_001250]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: EC-NUMBER
+
−
== Pathways  ==
+
−
* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
+
−
** '''14''' reactions found over '''14''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
** Source: [[orthology-aragem]]
 +
== Pathways associated ==
 +
* [[HISTSYN-PWY]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=5529917}}
−
{{#set: common name=ClpP/crotonase-like domain}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
+
{{#set: right end position=5534363}}
−
{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
+
{{#set: centisome position=84.70216    }}
−
{{#set: ec number=EC-4.2.1.17}}
+
{{#set: common name=Esi_0050_0038|Esi0050_0038|HIS4}}
−
{{#set: gene associated=Ec-16_003560|Ec-14_006530|Ec-06_001380|Ec-16_001250}}
+
{{#set: reaction associated=PRIBFAICARPISOM-RXN}}
−
{{#set: in pathway=PWY-7606}}
+
{{#set: pathway associated=HISTSYN-PWY}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 19:38, 21 March 2018

Gene Ec-03_004720

  • left end position:
    • 5529917
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5534363
  • centisome position:
    • 84.70216
  • Synonym(s):
    • Esi_0050_0038
    • Esi0050_0038
    • HIS4

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-03_004720&oldid=28407"