Difference between revisions of "PYRROLINECARBREDUCT-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DNA-LIGASE-ATP-RXN DNA-LIGASE-ATP-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** DNA ligas...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRROLINECARBREDUCT-RXN PYRROLINECARBREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DNA-LIGASE-ATP-RXN DNA-LIGASE-ATP-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRROLINECARBREDUCT-RXN PYRROLINECARBREDUCT-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** DNA ligase (ATP)
+
** pyrroline-5-carboxylate reductase
 +
** Pyrroline-5-carboxylate reductase
 +
** NAD(P)-binding domain
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.5.1.7 EC-6.5.1.7]
+
** [http://enzyme.expasy.org/EC/1.5.1.2 EC-1.5.1.2]
−
** [http://enzyme.expasy.org/EC/6.5.1.1 EC-6.5.1.1]
+
−
** [http://enzyme.expasy.org/EC/6.5.1.6 EC-6.5.1.6]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[DEOXYNUCLEOTIDESM]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[DNA-N]][c] '''=>''' 1 [[DEOXYNUCLEOTIDESM]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
+
** 2 [[PROTON]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''=>''' 1 [[PRO]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (deoxynucleotides)(m)[c] '''+''' 1 ATP[c] '''+''' 1 DNAn[c] '''=>''' 1 (deoxynucleotides)(m)[c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
+
** 2 H+[c] '''+''' 1 NAD(P)H[c] '''+''' 1 (S)-1-pyrroline-5-carboxylate[c] '''=>''' 1 L-proline[c] '''+''' 1 NAD(P)+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-07_005930]]
+
* Gene: [[Ec-07_007350]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: GO-TERM
−
* [[Ec-01_011680]]
+
* Gene: [[Ec-07_007360]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-07_007340]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-05_006410]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-03_004680]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PROSYN-PWY]], L-proline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6344]], L-ornithine degradation II (Stickland reaction): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344]
 +
** '''3''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-4981]], L-proline biosynthesis II (from arginine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4981 PWY-4981]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00381 R00381]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01248 R01248]
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01251 R01251]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P12000 P12000]
+
** [http://www.uniprot.org/uniprot/P32322 P32322]
−
** [http://www.uniprot.org/uniprot/P18858 P18858]
+
** [http://www.uniprot.org/uniprot/P27771 P27771]
−
** [http://www.uniprot.org/uniprot/P35970 P35970]
+
** [http://www.uniprot.org/uniprot/Q9CEF7 Q9CEF7]
−
** [http://www.uniprot.org/uniprot/Q9QNG8 Q9QNG8]
+
** [http://www.uniprot.org/uniprot/P14383 P14383]
−
** [http://www.uniprot.org/uniprot/Q9PM08 Q9PM08]
+
** [http://www.uniprot.org/uniprot/Q9PNL8 Q9PNL8]
−
** [http://www.uniprot.org/uniprot/Q57635 Q57635]
+
** [http://www.uniprot.org/uniprot/Q9JWW2 Q9JWW2]
−
** [http://www.uniprot.org/uniprot/P49917 P49917]
+
** [http://www.uniprot.org/uniprot/Q12740 Q12740]
−
** [http://www.uniprot.org/uniprot/P49916 P49916]
+
** [http://www.uniprot.org/uniprot/P22008 P22008]
−
** [http://www.uniprot.org/uniprot/P37913 P37913]
+
** [http://www.uniprot.org/uniprot/P54904 P54904]
−
** [http://www.uniprot.org/uniprot/P51892 P51892]
+
** [http://www.uniprot.org/uniprot/P0A9L8 P0A9L8]
−
** [http://www.uniprot.org/uniprot/P16272 P16272]
+
** [http://www.uniprot.org/uniprot/P17817 P17817]
−
** [http://www.uniprot.org/uniprot/P33798 P33798]
+
** [http://www.uniprot.org/uniprot/P32263 P32263]
−
** [http://www.uniprot.org/uniprot/P00970 P00970]
+
** [http://www.uniprot.org/uniprot/Q12641 Q12641]
−
** [http://www.uniprot.org/uniprot/P00969 P00969]
+
** [http://www.uniprot.org/uniprot/P46725 P46725]
−
** [http://www.uniprot.org/uniprot/P04819 P04819]
+
** [http://www.uniprot.org/uniprot/P74572 P74572]
−
** [http://www.uniprot.org/uniprot/P19088 P19088]
+
** [http://www.uniprot.org/uniprot/Q04708 Q04708]
−
** [http://www.uniprot.org/uniprot/P07717 P07717]
+
−
** [http://www.uniprot.org/uniprot/P26813 P26813]
+
−
** [http://www.uniprot.org/uniprot/Q02093 Q02093]
+
−
** [http://www.uniprot.org/uniprot/Q23694 Q23694]
+
−
** [http://www.uniprot.org/uniprot/Q67480 Q67480]
+
−
** [http://www.uniprot.org/uniprot/Q42572 Q42572]
+
−
** [http://www.uniprot.org/uniprot/P20492 P20492]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=DNA ligase (ATP)}}
+
{{#set: common name=pyrroline-5-carboxylate reductase}}
−
{{#set: ec number=EC-6.5.1.7}}
+
{{#set: common name=Pyrroline-5-carboxylate reductase}}
−
{{#set: ec number=EC-6.5.1.1}}
+
{{#set: common name=NAD(P)-binding domain}}
−
{{#set: ec number=EC-6.5.1.6}}
+
{{#set: ec number=EC-1.5.1.2}}
−
{{#set: gene associated=Ec-07_005930|Ec-01_011680}}
+
{{#set: gene associated=Ec-07_007350|Ec-07_007360|Ec-07_007340|Ec-05_006410|Ec-03_004680}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=PROSYN-PWY|ARG-PRO-PWY|PWY-6344|PWY-4981|PWY-3341}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 19:01, 21 March 2018

Reaction PYRROLINECARBREDUCT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • pyrroline-5-carboxylate reductase
    • Pyrroline-5-carboxylate reductase
    • NAD(P)-binding domain
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PROSYN-PWY, L-proline biosynthesis I: PROSYN-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • ARG-PRO-PWY, L-arginine degradation VI (arginase 2 pathway): ARG-PRO-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6344, L-ornithine degradation II (Stickland reaction): PWY-6344
    • 3 reactions found over 9 reactions in the full pathway
  • PWY-4981, L-proline biosynthesis II (from arginine): PWY-4981
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-3341, L-proline biosynthesis III: PWY-3341
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links






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