Difference between revisions of "Ec-07 004600"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-1437 RXN1G-1437] == * direction: ** LEFT-TO-RIGHT * common name: ** Trehalose 6-phosphate syn...")
(Created page with "Category:Gene == Gene Ec-07_004600 == * left end position: ** 4521464 * transcription direction: ** NEGATIVE * right end position: ** 4528967 * centisome position: ** 58.5...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-1437 RXN1G-1437] ==
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== Gene Ec-07_004600 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4521464
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* common name:
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* transcription direction:
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** Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase
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** NEGATIVE
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** HAD-like domain
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* right end position:
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* ec number:
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** 4528967
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** [http://enzyme.expasy.org/EC/3.1.3.12 EC-3.1.3.12]
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* centisome position:
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** 58.549755   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0125_0085
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** Esi0125_0085
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** CAT
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[CATAL-RXN]]
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** 1 [[CPD1G-772]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[CPD1G-1346]][c]
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* With common name(s):
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** 1 6-O-trans-methoxy-mycolyl-trehalose 6-phosphate[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 trehalose-trans-methoxy-mono-mycolate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-08_005270]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-05_002680]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-06_003140]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-24_004390]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-22_003320]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-20_003980]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-19_005250]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** Assignment: ec-number
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* Gene: [[Ec-11_002540]]
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* Reaction: [[RXN-14189]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[RXN66-1]]
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* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
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** '''30''' reactions found over '''182''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-5506]]
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* [[DETOX1-PWY-1]]
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* [[DETOX1-PWY]]
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* [[PWY66-162]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=4521464}}
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{{#set: common name=Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=HAD-like domain}}
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{{#set: right end position=4528967}}
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{{#set: ec number=EC-3.1.3.12}}
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{{#set: centisome position=58.549755    }}
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{{#set: gene associated=Ec-08_005270|Ec-05_002680|Ec-06_003140|Ec-24_004390|Ec-22_003320|Ec-20_003980|Ec-19_005250|Ec-11_002540}}
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{{#set: common name=Esi_0125_0085|Esi0125_0085|CAT}}
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{{#set: in pathway=PWYG-321}}
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{{#set: reaction associated=CATAL-RXN|RXN-14189|RXN66-1}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-5506|DETOX1-PWY-1|DETOX1-PWY|PWY66-162}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:39, 21 March 2018

Gene Ec-07_004600

  • left end position:
    • 4521464
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4528967
  • centisome position:
    • 58.549755
  • Synonym(s):
    • Esi_0125_0085
    • Esi0125_0085
    • CAT

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-07_004600&oldid=28422"