Difference between revisions of "RXN-10060"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7676 RXN-7676] == * direction: ** LEFT-TO-RIGHT * common name: ** chlorophyllide-a monooxygenas...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10060 RXN-10060] == * direction: ** LEFT-TO-RIGHT * common name: ** NAD(P)-binding domain * ec...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7676 RXN-7676] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10060 RXN-10060] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** chlorophyllide-a monooxygenase
+
** NAD(P)-binding domain
−
** chlorophyllide a oxygenase [overall]
+
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
* Synonym(s):
 
* Synonym(s):
−
** chlorophyllide a oxygenase
 
−
** chlorophyll-b synthase
 
−
** CAO
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CPD-7015]][c] '''+''' 1 [[WATER]][c]
+
** 1 [[NADPH]][c] '''+''' 1 [[3-oxo-cerotoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[R-3-hydroxycerotoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 chlorophyllide a[c] '''+''' 1 NADPH[c] '''+''' 1 oxygen[c] '''=>''' 1 NADP+[c] '''+''' 1 71-hydroxychlorophyllide a[c] '''+''' 1 H2O[c]
+
** 1 NADPH[c] '''+''' 1 a 3-oxo-cerotoyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 a (3R)-3-hydroxycerotoyl-[acp][c] '''+''' 1 NADP+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-06_002880]]
+
* Gene: [[Ec-01_007100]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: GO-TERM
+
*** Assignment: EC-NUMBER
−
* Gene: [[Ec-03_003240]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-06_002860]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-06_002840]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-28_000110]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-11_003750]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-14_003590]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5068]], chlorophyll cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5068 PWY-5068]
+
* [[PWY-6113]], superpathway of mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6113 PWY-6113]
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
** '''7''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
 +
** '''30''' reactions found over '''182''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22676 22676]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R08203 R08203]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=chlorophyllide-a monooxygenase}}
+
{{#set: common name=NAD(P)-binding domain}}
−
{{#set: common name=chlorophyllide a oxygenase [overall]}}
+
{{#set: ec number=EC-1.1.1.100}}
−
{{#set: common name=chlorophyllide a oxygenase|chlorophyll-b synthase|CAO}}
+
{{#set: gene associated=Ec-01_007100}}
−
{{#set: gene associated=Ec-06_002880|Ec-03_003240|Ec-06_002860|Ec-06_002840|Ec-28_000110|Ec-11_003750|Ec-14_003590}}
+
{{#set: in pathway=PWY-6113|PWYG-321}}
−
{{#set: in pathway=PWY-5068}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:39, 21 March 2018

Reaction RXN-10060

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • NAD(P)-binding domain
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6113, superpathway of mycolate biosynthesis: PWY-6113
    • 7 reactions found over 12 reactions in the full pathway
  • PWYG-321, mycolate biosynthesis: PWYG-321
    • 30 reactions found over 182 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-10060&oldid=28479"