Difference between revisions of "Ec-01 001610"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9516 RXN-9516] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-hexanoyl-[acyl-carrier...")
(Created page with "Category:Gene == Gene Ec-01_001610 == * left end position: ** 1286185 * transcription direction: ** POSITIVE * right end position: ** 1289470 * centisome position: ** 12.4...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9516 RXN-9516] ==
+
== Gene Ec-01_001610 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 1286185
−
* common name:
+
* transcription direction:
−
** 3-oxo-hexanoyl-[acyl-carrier protein] synthase
+
** POSITIVE
−
** Thiolase-like, subgroup
+
* right end position:
−
** Beta-ketoacyl synthase, N-terminal
+
** 1289470
−
** beta-ketoacyl synthase, partial
+
* centisome position:
−
** 3-oxoacyl-[acyl-carrier-protein] synthase
+
** 12.464441   
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0112_0027
 +
** Esi0112_0027
 +
** SATase
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[SERINE-O-ACETTRAN-RXN]]
−
** 1 [[Butanoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''=>''' 1 [[3-oxo-hexanoyl-ACPs]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
−
* With common name(s):
+
−
** 1 a butyryl-[acp][c] '''+''' 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''=>''' 1 a 3-oxo-hexanoyl-[acp][c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 CO2[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* Gene: [[Ec-12_000650]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
** Source: [[orthology-aragem]]
+
−
** Source: [[orthology-aragem]]
+
−
* Gene: [[Ec-12_000640]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Ec-27_003480]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Ec-27_002090]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[orthology-aragem]]
+
−
** Source: [[orthology-aragem]]
+
−
== Pathways  ==
+
−
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
+
−
** '''28''' reactions found over '''31''' reactions in the full pathway
+
−
* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7388 PWY-7388]
+
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-aragem]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
== Pathways associated ==
 +
* [[CYSTSYN-PWY]]
 +
* [[PWY-7274]]
 +
* [[PWY-6936]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=1286185}}
−
{{#set: common name=3-oxo-hexanoyl-[acyl-carrier protein] synthase}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: common name=Thiolase-like, subgroup}}
+
{{#set: right end position=1289470}}
−
{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
+
{{#set: centisome position=12.464441    }}
−
{{#set: common name=beta-ketoacyl synthase, partial}}
+
{{#set: common name=Esi_0112_0027|Esi0112_0027|SATase}}
−
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
+
{{#set: reaction associated=SERINE-O-ACETTRAN-RXN}}
−
{{#set: ec number=EC-2.3.1.41}}
+
{{#set: pathway associated=CYSTSYN-PWY|PWY-7274|PWY-6936}}
−
{{#set: gene associated=Ec-12_000650|Ec-12_000640|Ec-27_003480|Ec-27_002090}}
+
−
{{#set: in pathway=PWY-5971|PWY-7388}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:39, 21 March 2018

Gene Ec-01_001610

  • left end position:
    • 1286185
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1289470
  • centisome position:
    • 12.464441
  • Synonym(s):
    • Esi_0112_0027
    • Esi0112_0027
    • SATase

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-01_001610&oldid=28500"