Difference between revisions of "ISPH2-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD3DJ-11366 CPD3DJ-11366] == * smiles: ** CCCCCCCCCCCCCC=CC(O)C([N+])COP(=O)([O-])[O-] * inchi...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISPH2-RXN ISPH2-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 4-hydroxy-3-methylbut-2-eny...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD3DJ-11366 CPD3DJ-11366] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISPH2-RXN ISPH2-RXN] ==
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* smiles:
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* direction:
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** CCCCCCCCCCCCCC=CC(O)C([N+])COP(=O)([O-])[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=DUYSYHSSBDVJSM-KRWOKUGFSA-M
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* common name:
 
* common name:
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** sphingosine 1-phosphate
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** 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
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* molecular weight:
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* ec number:
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** 378.468   
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** [http://enzyme.expasy.org/EC/1.17.7.4 EC-1.17.7.4]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN3DJ-11230]]
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* With identifiers:
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* [[RXN3DJ-25]]
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** 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 1 [[HYDROXY-METHYL-BUTENYL-DIP]][c] '''=>''' 1 [[WATER]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[DELTA3-ISOPENTENYL-PP]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[RXN3DJ-11417]]
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** 2 H+[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 1 (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate[c] '''=>''' 1 H2O[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 isopentenyl diphosphate[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-06_002680]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* LIGAND-CPD:
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?C06124 C06124]
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** [http://www.genome.jp/dbget-bin/www_bget?R08209 R08209]
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* CHEBI:
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** [http://www.genome.jp/dbget-bin/www_bget?R05884 R05884]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=60119 60119]
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{{#set: direction=LEFT-TO-RIGHT}}
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* METABOLIGHTS : MTBLC60119
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{{#set: common name=4-hydroxy-3-methylbut-2-enyl diphosphate reductase}}
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* PUBCHEM:
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{{#set: ec number=EC-1.17.7.4}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=46878582 46878582]
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{{#set: gene associated=Ec-06_002680}}
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* HMDB : HMDB00277
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{{#set: in pathway=NONMEVIPP-PWY|PWY-7560}}
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{{#set: smiles=CCCCCCCCCCCCCC=CC(O)C([N+])COP(=O)([O-])[O-]}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: inchi key=InChIKey=DUYSYHSSBDVJSM-KRWOKUGFSA-M}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: common name=sphingosine 1-phosphate}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: molecular weight=378.468    }}
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{{#set: consumed by=RXN3DJ-11230|RXN3DJ-25}}
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{{#set: produced by=RXN3DJ-11417}}
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Latest revision as of 19:16, 21 March 2018

Reaction ISPH2-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • NONMEVIPP-PWY, methylerythritol phosphate pathway I: NONMEVIPP-PWY
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7560, methylerythritol phosphate pathway II: PWY-7560
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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