Difference between revisions of "CHD-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYTIDEAM2-RXN CYTIDEAM2-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHD-RXN CHD-RXN] == * direction: ** REVERSIBLE * common name: ** choline dehydrogenase * ec number:...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYTIDEAM2-RXN CYTIDEAM2-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHD-RXN CHD-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* common name:
 +
** choline dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.5.4.5 EC-3.5.4.5]
+
** [http://enzyme.expasy.org/EC/1.1.99.1 EC-1.1.99.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[CYTIDINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[URIDINE]][c] '''+''' 1 [[AMMONIUM]][c]
+
** 1 [[Acceptor]][c] '''+''' 1 [[CHOLINE]][c] '''<=>''' 1 [[Donor-H2]][c] '''+''' 1 [[BETAINE_ALDEHYDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 cytidine[c] '''+''' 1 H+[c] '''=>''' 1 uridine[c] '''+''' 1 ammonium[c]
+
** 1 an oxidized unknown electron acceptor[c] '''+''' 1 choline[c] '''<=>''' 1 an reduced unknown electron acceptor[c] '''+''' 1 betaine aldehyde[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-00_005920]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7193]], pyrimidine ribonucleosides salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7193 PWY-7193]
+
* [[CHOLINE-BETAINE-ANA-PWY]], choline degradation I: [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-BETAINE-ANA-PWY CHOLINE-BETAINE-ANA-PWY]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY0-1295]], pyrimidine ribonucleosides degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1295 PWY0-1295]
+
* [[BETSYN-PWY]], glycine betaine biosynthesis I (Gram-negative bacteria): [http://metacyc.org/META/NEW-IMAGE?object=BETSYN-PWY BETSYN-PWY]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6556]], pyrimidine ribonucleosides salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6556 PWY-6556]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16069 16069]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17433 17433]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01878 R01878]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01025 R01025]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P47718 P47718]
+
** [http://www.uniprot.org/uniprot/P17444 P17444]
−
** [http://www.uniprot.org/uniprot/P0ABF6 P0ABF6]
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/P47298 P47298]
+
{{#set: common name=choline dehydrogenase}}
−
** [http://www.uniprot.org/uniprot/Q9CFM8 Q9CFM8]
+
{{#set: ec number=EC-1.1.99.1}}
−
** [http://www.uniprot.org/uniprot/P32320 P32320]
+
{{#set: gene associated=Ec-00_005920}}
−
** [http://www.uniprot.org/uniprot/P75051 P75051]
+
{{#set: in pathway=CHOLINE-BETAINE-ANA-PWY|BETSYN-PWY}}
−
** [http://www.uniprot.org/uniprot/Q9SU87 Q9SU87]
+
−
** [http://www.uniprot.org/uniprot/Q9SU86 Q9SU86]
+
−
** [http://www.uniprot.org/uniprot/O65571 O65571]
+
−
** [http://www.uniprot.org/uniprot/Q9S847 Q9S847]
+
−
** [http://www.uniprot.org/uniprot/Q9S7L8 Q9S7L8]
+
−
** [http://www.uniprot.org/uniprot/Q9S7S2 Q9S7S2]
+
−
** [http://www.uniprot.org/uniprot/O65896 O65896]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: ec number=EC-3.5.4.5}}
+
−
{{#set: in pathway=PWY-7193|PWY0-1295|PWY-6556}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 19:16, 21 March 2018

Reaction CHD-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • choline dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 an oxidized unknown electron acceptor[c] + 1 choline[c] <=> 1 an reduced unknown electron acceptor[c] + 1 betaine aldehyde[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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