Difference between revisions of "Ec-00 005850"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7665 RXN-7665] == * direction: ** LEFT-TO-RIGHT * common name: ** Geranylgeranyl reductase * Sy...")
(Created page with "Category:Gene == Gene Ec-00_005850 == * left end position: ** 9316147 * transcription direction: ** NEGATIVE * right end position: ** 9318754 * centisome position: ** 49.1...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7665 RXN-7665] ==
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== Gene Ec-00_005850 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 9316147
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* common name:
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* transcription direction:
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** Geranylgeranyl reductase
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** NEGATIVE
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* right end position:
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** 9318754
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* centisome position:
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** 49.170982   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0471_0010
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** Esi0471_0010
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** CYP5163A2
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.14.13.79-RXN]]
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** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-7004]][c] '''=>''' 1 [[CPD-7006]][c] '''+''' 1 [[NADP]][c]
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** Source: [[orthology-aragem]]
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* With common name(s):
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* Reaction: [[RXN-1121]]
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** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 dihydrogeranylgeranyl chlorophyll a[c] '''=>''' 1 tetrahydrogeranylgeranyl chlorophyll a[c] '''+''' 1 NADP+[c]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-3661]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-aragem]]
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-4225]]
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* Gene: [[Ec-03_003520]]
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** Source: [[orthology-aragem]]
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** Source: [[annotation-esiliculosus_genome]]
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* Reaction: [[RXN-4231]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* Reaction: [[RXN-715]]
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* [[PWY-5064]], chlorophyll a biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5064 PWY-5064]
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** Source: [[orthology-aragem]]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* Reaction: [[RXN-773]]
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== Reconstruction information  ==
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** Source: [[orthology-aragem]]
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* Category: [[annotation]]
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* Reaction: [[RXN-8038]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-8040]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN1F-147]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN1F-148]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN1F-150]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN1F-151]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN1F-160]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN1F-161]]
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** Source: [[orthology-aragem]]
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* Reaction: [[UNSPECIFIC-MONOOXYGENASE-RXN]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-5034]]
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* [[PWY-699]]
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* [[PWY-7591]]
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* [[PWY-2181]]
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* [[PWY-2582]]
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* [[PWY-5947]]
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* [[PWY-5047]]
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* [[PWY-5640]]
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* [[PWY-5946]]
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* [[PWY-5943]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=9316147}}
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{{#set: common name=Geranylgeranyl reductase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: gene associated=Ec-03_003520}}
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{{#set: right end position=9318754}}
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{{#set: in pathway=PWY-5064}}
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{{#set: centisome position=49.170982    }}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=Esi_0471_0010|Esi0471_0010|CYP5163A2}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reaction associated=1.14.13.79-RXN|RXN-1121|RXN-3661|RXN-4225|RXN-4231|RXN-715|RXN-773|RXN-8038|RXN-8040|RXN1F-147|RXN1F-148|RXN1F-150|RXN1F-151|RXN1F-160|RXN1F-161|UNSPECIFIC-MONOOXYGENASE-RXN}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: pathway associated=PWY-5034|PWY-699|PWY-7591|PWY-2181|PWY-2582|PWY-5947|PWY-5047|PWY-5640|PWY-5946|PWY-5943}}

Latest revision as of 19:42, 21 March 2018

Gene Ec-00_005850

  • left end position:
    • 9316147
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 9318754
  • centisome position:
    • 49.170982
  • Synonym(s):
    • Esi_0471_0010
    • Esi0471_0010
    • CYP5163A2

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-00_005850&oldid=28857"