Difference between revisions of "Ec-26 003280"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.176-RXN 2.3.1.176-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
(Created page with "Category:Gene == Gene Ec-26_003280 == * left end position: ** 3612628 * transcription direction: ** POSITIVE * right end position: ** 3619125 * centisome position: ** 54.8...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.176-RXN 2.3.1.176-RXN] ==
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== Gene Ec-26_003280 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3612628
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.3.1.176 EC-2.3.1.176]
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** POSITIVE
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* right end position:
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** 3619125
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* centisome position:
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** 54.875244   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0104_0080
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** Esi0104_0080
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GPPSYN-RXN]]
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** 1 [[CO-A]][c] '''+''' 1 [[CPD-7257]][c] '''=>''' 1 [[CPD-202]][c] '''+''' 1 [[PROPIONYL-COA]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 coenzyme A[c] '''+''' 1 3α,7α,12α-trihydroxy-24-oxo-5-β-cholestanoyl CoA[c] '''=>''' 1 choloyl-CoA[c] '''+''' 1 propanoyl-CoA[c]
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* Reaction: [[RXN-11056]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-11057]]
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* Gene: [[Ec-26_003940]]
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** Source: [[annotation-esiliculosus_genome]]
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** Source: [[orthology-aragem]]
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*** Assignment: ec-number
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== Pathways ==
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* Reaction: [[RXN-13064]]
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* [[PWY-6061]], bile acid biosynthesis, neutral pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6061 PWY-6061]
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** Source: [[annotation-esiliculosus_genome]]
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** '''1''' reactions found over '''29''' reactions in the full pathway
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*** Assignment: ec-number
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== Reconstruction information  ==
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* Reaction: [[RXN-17625]]
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* Category: [[orthology]]
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** Source: [[annotation-esiliculosus_genome]]
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** Source: [[orthology-aragem]]
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*** Assignment: ec-number
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*** Tool: [[pantograph]]
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* Reaction: [[RXN-17627]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-8630]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-8872]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-146]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-161]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-163]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-169]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-181]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[UNSPECIFIC-MONOOXYGENASE-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-7736]]
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* [[PWY-5665]]
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* [[PWY-6859]]
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* [[PWY-7709]]
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* [[PWY-6383]]
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* [[PWY-7466]]
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* [[PWY-7182]]
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* [[PWY-7141]]
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* [[PWY-5123]]
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* [[PWY-5122]]
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* [[PWY-5451]]
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* [[PWY66-201]]
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* [[PWY66-221]]
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* [[PWY-7102]]
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* [[PWY-7659]]
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* [[PWY66-241]]
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* [[PWY-7410]]
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* [[PWY-6992]]
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* [[PWY-6398]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=3612628}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16865 16865]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=3619125}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03719 R03719]
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{{#set: centisome position=54.875244    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0104_0080|Esi0104_0080}}
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{{#set: ec number=EC-2.3.1.176}}
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{{#set: reaction associated=GPPSYN-RXN|RXN-11056|RXN-11057|RXN-13064|RXN-17625|RXN-17627|RXN-8630|RXN-8872|RXN66-146|RXN66-161|RXN66-163|RXN66-169|RXN66-181|UNSPECIFIC-MONOOXYGENASE-RXN}}
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{{#set: gene associated=Ec-26_003940}}
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{{#set: pathway associated=PWY-7736|PWY-5665|PWY-6859|PWY-7709|PWY-6383|PWY-7466|PWY-7182|PWY-7141|PWY-5123|PWY-5122|PWY-5451|PWY66-201|PWY66-221|PWY-7102|PWY-7659|PWY66-241|PWY-7410|PWY-6992|PWY-6398}}
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{{#set: in pathway=PWY-6061}}
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−
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-aragem}}
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−
{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:47, 21 March 2018

Gene Ec-26_003280

  • left end position:
    • 3612628
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3619125
  • centisome position:
    • 54.875244
  • Synonym(s):
    • Esi_0104_0080
    • Esi0104_0080

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-26_003280&oldid=29325"