Difference between revisions of "Ec-14 001590"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREONINE--TRNA-LIGASE-RXN THREONINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
(Created page with "Category:Gene == Gene Ec-14_001590 == * left end position: ** 1497985 * transcription direction: ** NEGATIVE * right end position: ** 1502740 * centisome position: ** 22.8...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREONINE--TRNA-LIGASE-RXN THREONINE--TRNA-LIGASE-RXN] ==
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== Gene Ec-14_001590 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1497985
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* common name:
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* transcription direction:
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** threonine--tRNA ligase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/6.1.1.3 EC-6.1.1.3]
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** 1502740
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* centisome position:
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** 22.833647   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0182_0008
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** Esi0182_0008
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GUANYL-KIN-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[THR]][c] '''+''' 1 [[THR-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Charged-THR-tRNAs]][c]
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* With common name(s):
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** 1 H+[c] '''+''' 1 ATP[c] '''+''' 1 L-threonine[c] '''+''' 1 a tRNAthr[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an L-threonyl-[tRNAthr][c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-05_005060]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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* [[PWY-7221]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=1497985}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24624 24624]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=1502740}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03663 R03663]
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{{#set: centisome position=22.833647    }}
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* UNIPROT:
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{{#set: common name=Esi_0182_0008|Esi0182_0008}}
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** [http://www.uniprot.org/uniprot/O83809 O83809]
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{{#set: reaction associated=GUANYL-KIN-RXN}}
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** [http://www.uniprot.org/uniprot/Q9JVA3 Q9JVA3]
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{{#set: pathway associated=PWY-7221}}
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** [http://www.uniprot.org/uniprot/P56071 P56071]
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** [http://www.uniprot.org/uniprot/O58430 O58430]
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** [http://www.uniprot.org/uniprot/P47615 P47615]
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** [http://www.uniprot.org/uniprot/O05947 O05947]
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** [http://www.uniprot.org/uniprot/Q9PIS3 Q9PIS3]
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** [http://www.uniprot.org/uniprot/O67583 O67583]
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** [http://www.uniprot.org/uniprot/O27504 O27504]
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** [http://www.uniprot.org/uniprot/O51662 O51662]
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** [http://www.uniprot.org/uniprot/Q9ZMV3 Q9ZMV3]
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** [http://www.uniprot.org/uniprot/Q9Z7A0 Q9Z7A0]
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** [http://www.uniprot.org/uniprot/Q9WZJ9 Q9WZJ9]
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** [http://www.uniprot.org/uniprot/Q9CED2 Q9CED2]
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** [http://www.uniprot.org/uniprot/P43014 P43014]
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** [http://www.uniprot.org/uniprot/P46244 P46244]
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** [http://www.uniprot.org/uniprot/P75225 P75225]
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** [http://www.uniprot.org/uniprot/Q48989 Q48989]
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** [http://www.uniprot.org/uniprot/P0A8M3 P0A8M3]
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** [http://www.uniprot.org/uniprot/O04630 O04630]
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** [http://www.uniprot.org/uniprot/P18255 P18255]
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** [http://www.uniprot.org/uniprot/P18256 P18256]
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** [http://www.uniprot.org/uniprot/P04801 P04801]
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** [http://www.uniprot.org/uniprot/P07236 P07236]
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** [http://www.uniprot.org/uniprot/P26639 P26639]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=threonine--tRNA ligase}}
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{{#set: ec number=EC-6.1.1.3}}
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{{#set: gene associated=Ec-05_005060}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:48, 21 March 2018

Gene Ec-14_001590

  • left end position:
    • 1497985
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 1502740
  • centisome position:
    • 22.833647
  • Synonym(s):
    • Esi_0182_0008
    • Esi0182_0008

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-14_001590&oldid=29398"