Difference between revisions of "Ec-06 003440"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=URIDINEKIN-RXN URIDINEKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphoribulokina...")
(Created page with "Category:Gene == Gene Ec-06_003440 == * left end position: ** 2824049 * transcription direction: ** POSITIVE * right end position: ** 2835426 * centisome position: ** 32.2...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=URIDINEKIN-RXN URIDINEKIN-RXN] ==
+
== Gene Ec-06_003440 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 2824049
−
* common name:
+
* transcription direction:
−
** Phosphoribulokinase/uridine kinase
+
** POSITIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/2.7.1.48 EC-2.7.1.48]
+
** 2835426
 +
* centisome position:
 +
** 32.246254   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0064_0020
 +
** Esi0064_0020
 +
** MSDH
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[1.2.1.27-RXN]]
−
** 1 [[URIDINE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[UMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 uridine[c] '''+''' 1 ATP[c] '''=>''' 1 UMP[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
+
* Reaction: [[RXN-11213]]
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* Gene: [[Ec-26_002450]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: AUTOMATED-NAME-MATCH
+
*** Assignment: ec-number
−
== Pathways  ==
+
* Reaction: [[RXN-2902]]
−
* [[PWY-7193]], pyrimidine ribonucleosides salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7193 PWY-7193]
+
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: automated-name-match
 +
== Pathways associated ==
 +
* [[PWY-7574]]
 +
* [[P562-PWY]]
 +
* [[BETA-ALA-DEGRADATION-I-PWY]]
 +
* [[PWY-1781]]
 +
* [[VALDEG-PWY]]
 +
* [[PWY-5642]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=2824049}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16826 16826]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=2835426}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00964 R00964]
+
{{#set: centisome position=32.246254    }}
−
* UNIPROT:
+
{{#set: common name=Esi_0064_0020|Esi0064_0020|MSDH}}
−
** [http://www.uniprot.org/uniprot/P0A8F4 P0A8F4]
+
{{#set: reaction associated=1.2.1.27-RXN|RXN-11213|RXN-2902}}
−
** [http://www.uniprot.org/uniprot/P47622 P47622]
+
{{#set: pathway associated=PWY-7574|P562-PWY|BETA-ALA-DEGRADATION-I-PWY|PWY-1781|VALDEG-PWY|PWY-5642}}
−
** [http://www.uniprot.org/uniprot/Q9CF21 Q9CF21]
+
−
** [http://www.uniprot.org/uniprot/P44533 P44533]
+
−
** [http://www.uniprot.org/uniprot/P27515 P27515]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=Phosphoribulokinase/uridine kinase}}
+
−
{{#set: ec number=EC-2.7.1.48}}
+
−
{{#set: gene associated=Ec-26_002450}}
+
−
{{#set: in pathway=PWY-7193}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 19:48, 21 March 2018

Gene Ec-06_003440

  • left end position:
    • 2824049
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2835426
  • centisome position:
    • 32.246254
  • Synonym(s):
    • Esi_0064_0020
    • Esi0064_0020
    • MSDH

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-06_003440&oldid=29411"