Difference between revisions of "RXN-11213"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Ec-07_006100 == * left end position: ** 5960526 * transcription direction: ** NEGATIVE * right end position: ** 5970775 * centisome position: ** 77.1...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11213 RXN-11213] == * direction: ** LEFT-TO-RIGHT * common name: ** Methylmalonate Semialdehyde...")
 
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Ec-07_006100 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11213 RXN-11213] ==
−
* left end position:
+
* direction:
−
** 5960526
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** NEGATIVE
+
** Methylmalonate Semialdehyde Dehydrogenase
−
* right end position:
+
** Methylmalonate-semialdehyde dehydrogenase
−
** 5970775
+
* ec number:
−
* centisome position:
+
** [http://enzyme.expasy.org/EC/1.2.1.27 EC-1.2.1.27]
−
** 77.18460   
+
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0148_0068
 
−
** Esi0148_0068
 
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* Reaction: [[PROTEIN-KINASE-RXN]]
+
* With identifiers:
 +
** 1 [[CH3-MALONATE-S-ALD]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PROPIONYL-COA]][c] '''+''' 1 [[HCO3]][c]
 +
* With common name(s):
 +
** 1 (S)-methylmalonate-semialdehyde[c] '''+''' 1 coenzyme A[c] '''+''' 1 NAD+[c] '''+''' 1 H2O[c] '''=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 propanoyl-CoA[c] '''+''' 1 hydrogen carbonate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-10_003810]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-06_003440]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: go-term
+
*** Tool: [[pathwaytools]]
−
== Pathways associated ==
+
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=5960526}}
+
* RHEA:
−
{{#set: transcription direction=NEGATIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20804 20804]
−
{{#set: right end position=5970775}}
+
* LIGAND-RXN:
−
{{#set: centisome position=77.18460    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00935 R00935]
−
{{#set: common name=Esi_0148_0068|Esi0148_0068}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: reaction associated=PROTEIN-KINASE-RXN}}
+
{{#set: common name=Methylmalonate Semialdehyde Dehydrogenase}}
 +
{{#set: common name=Methylmalonate-semialdehyde dehydrogenase}}
 +
{{#set: ec number=EC-1.2.1.27}}
 +
{{#set: gene associated=Ec-10_003810|Ec-06_003440}}
 +
{{#set: in pathway=VALDEG-PWY}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:50, 21 March 2018

Reaction RXN-11213

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Methylmalonate Semialdehyde Dehydrogenase
    • Methylmalonate-semialdehyde dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (S)-methylmalonate-semialdehyde[c] + 1 coenzyme A[c] + 1 NAD+[c] + 1 H2O[c] => 1 NADH[c] + 1 H+[c] + 1 propanoyl-CoA[c] + 1 hydrogen carbonate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • VALDEG-PWY, L-valine degradation I: VALDEG-PWY
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-11213&oldid=29647"