Difference between revisions of "RXN0-5180"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Ec-27_003870 == * left end position: ** 3391094 * transcription direction: ** NEGATIVE * right end position: ** 3399694 * centisome position: ** 52.5...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5180 RXN0-5180] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/2.5...")
 
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Ec-27_003870 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5180 RXN0-5180] ==
−
* left end position:
+
* direction:
−
** 3391094
+
** REVERSIBLE
−
* transcription direction:
+
* ec number:
−
** NEGATIVE
+
** [http://enzyme.expasy.org/EC/2.5.1 EC-2.5.1]
−
* right end position:
+
−
** 3399694
+
−
* centisome position:
+
−
** 52.575855   
+
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0000_0474
 
−
** Esi0000_0474
 
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* Reaction: [[ACID-PHOSPHATASE-RXN]]
+
* With identifiers:
−
** Source: [[annotation-esiliculosus_genome]]
+
** 1 [[FARNESYL-PP]][c] '''+''' 1 [[DELTA3-ISOPENTENYL-PP]][c] '''<=>''' 1 [[CPD0-1028]][c] '''+''' 1 [[PPI]][c]
−
*** Assignment: go-term
+
* With common name(s):
−
* Reaction: [[RXN-5822]]
+
** 1 (2E,6E)-farnesyl diphosphate[c] '''+''' 1 isopentenyl diphosphate[c] '''<=>''' 1 2-cis,6-trans,10-trans-geranylgeranyl diphosphate[c] '''+''' 1 diphosphate[c]
−
** Source: [[annotation-esiliculosus_genome]]
+
 
−
*** Assignment: go-term
+
== Genes associated with this reaction  ==
−
== Pathways associated ==
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[PWY-6348]]
+
* Gene: [[Ec-27_002140]]
−
* [[PWY-5083]]
+
** Source: [[orthology-aragem]]
−
* [[NADPHOS-DEPHOS-PWY]]
+
* Gene: [[Ec-05_002690]]
−
* [[NAD-BIOSYNTHESIS-II]]
+
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-17_003520]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-18_000990]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-08_002270]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-24_003910]]
 +
** Source: [[orthology-aragem]]
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=3391094}}
+
* RHEA:
−
{{#set: transcription direction=NEGATIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31282 31282]
−
{{#set: right end position=3399694}}
+
* LIGAND-RXN:
−
{{#set: centisome position=52.575855    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R05555 R05555]
−
{{#set: common name=Esi_0000_0474|Esi0000_0474}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: reaction associated=ACID-PHOSPHATASE-RXN|RXN-5822}}
+
{{#set: ec number=EC-2.5.1}}
−
{{#set: pathway associated=PWY-6348|PWY-5083|NADPHOS-DEPHOS-PWY|NAD-BIOSYNTHESIS-II}}
+
{{#set: gene associated=Ec-27_002140|Ec-05_002690|Ec-17_003520|Ec-18_000990|Ec-08_002270|Ec-24_003910}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:50, 21 March 2018

Reaction RXN0-5180

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (2E,6E)-farnesyl diphosphate[c] + 1 isopentenyl diphosphate[c] <=> 1 2-cis,6-trans,10-trans-geranylgeranyl diphosphate[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN0-5180&oldid=29730"