Difference between revisions of "RXN-7790"

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(Created page with "Category:Gene == Gene Ec-18_003420 == * left end position: ** 3416508 * transcription direction: ** POSITIVE * right end position: ** 3426404 * centisome position: ** 69.3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7790 RXN-7790] == * direction: ** LEFT-TO-RIGHT * common name: ** Branched chain alpha-keto aci...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Ec-18_003420 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7790 RXN-7790] ==
* left end position:
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* direction:
** 3416508
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** LEFT-TO-RIGHT
* transcription direction:
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* common name:
** POSITIVE
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** Branched chain alpha-keto acid dehydrogenase E1 beta subunit
* right end position:
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** 3426404
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* centisome position:
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** 69.34880   
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* Synonym(s):
 
* Synonym(s):
** Esi_0022_0141
 
** Esi0022_0141
 
** PDH
 
  
== Reactions associated ==
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== Reaction Formula ==
* Reaction: [[PYFLAVOXRE-RXN]]
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* With identifiers:
** Source: [[annotation-esiliculosus_genome]]
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** 1 [[2-OXOBUTANOATE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[PROPIONYL-COA]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
*** Assignment: automated-name-match
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* With common name(s):
* Reaction: [[PYRUFLAVREDUCT-RXN]]
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** 1 2-oxobutanoate[c] '''+''' 1 coenzyme A[c] '''+''' 1 NAD+[c] '''=>''' 1 NADH[c] '''+''' 1 propanoyl-CoA[c] '''+''' 1 CO2[c]
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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== Genes associated with this reaction  ==
* Reaction: [[PYRUVDEH-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
** Source: [[orthology-aragem]]
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* Gene: [[Ec-06_009010]]
* Reaction: [[RXN-12508]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-12583]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
*** Assignment: ec-number
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*** Assignment: AUTOMATED-NAME-MATCH
** Source: [[orthology-aragem]]
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== Pathways  ==
* Reaction: [[RXN0-1134]]
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* [[PWY66-428]], L-threonine degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-428 PWY66-428]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5130]], 2-oxobutanoate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5130 PWY-5130]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
*** Assignment: ec-number
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*** Tool: [[pathwaytools]]
== Pathways associated ==
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* [[PWY-7384]]
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* [[P23-PWY]]
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* [[PWY-5493]]
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* [[PWY-6587]]
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* [[PWY-5497]]
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* [[PWY-6588]]
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* [[P42-PWY]]
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* [[P142-PWY]]
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* [[PWY-6886]]
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* [[PWY-6876]]
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* [[NPGLUCAT-PWY]]
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* [[CENTFERM-PWY]]
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* [[PYRUVDEHYD-PWY]]
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* [[PWY-5600]]
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* [[PWY-6142]]
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* [[PWY-5482]]
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* [[PWY-5483]]
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* [[PWY-6583]]
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* [[PWY-7218]]
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* [[PWY-5392]]
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* [[PWY-5537]]
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* [[GLUDEG-II-PWY]]
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* [[PWY-6863]]
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* [[PWY-5538]]
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* [[GLYCOLYSIS-TCA-GLYOX-BYPASS]]
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== External links  ==
 
== External links  ==
{{#set: left end position=3416508}}
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* RHEA:
{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33223 33223]
{{#set: right end position=3426404}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: centisome position=69.34880    }}
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{{#set: common name=Branched chain alpha-keto acid dehydrogenase E1 beta subunit}}
{{#set: common name=Esi_0022_0141|Esi0022_0141|PDH}}
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{{#set: gene associated=Ec-06_009010}}
{{#set: reaction associated=PYFLAVOXRE-RXN|PYRUFLAVREDUCT-RXN|PYRUVDEH-RXN|RXN-12508|RXN-12583|RXN0-1134}}
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{{#set: in pathway=PWY66-428|PWY-5130}}
{{#set: pathway associated=PWY-7384|P23-PWY|PWY-5493|PWY-6587|PWY-5497|PWY-6588|P42-PWY|P142-PWY|PWY-6886|PWY-6876|NPGLUCAT-PWY|CENTFERM-PWY|PYRUVDEHYD-PWY|PWY-5600|PWY-6142|PWY-5482|PWY-5483|PWY-6583|PWY-7218|PWY-5392|PWY-5537|GLUDEG-II-PWY|PWY-6863|PWY-5538|GLYCOLYSIS-TCA-GLYOX-BYPASS}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:51, 21 March 2018

Reaction RXN-7790

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Branched chain alpha-keto acid dehydrogenase E1 beta subunit
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-428, L-threonine degradation V: PWY66-428
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5130, 2-oxobutanoate degradation I: PWY-5130
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links