Difference between revisions of "RXN1F-150"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-19169 CPD-19169] == * smiles: ** CCCCCCCCC=CCCCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-150 RXN1F-150] == * direction: ** LEFT-TO-RIGHT * common name: ** lycopene beta cyclase * ec...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-19169 CPD-19169] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-150 RXN1F-150] ==
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* smiles:
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* direction:
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** CCCCCCCCC=CCCCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=AVEYYKDEKGJVBU-BPMMELMSSA-J
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* common name:
 
* common name:
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** 3-oxo-(9Z)-octadecenoyl-CoA
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** lycopene beta cyclase
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* molecular weight:
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* ec number:
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** 1041.936   
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** [http://enzyme.expasy.org/EC/5.5.1.19 EC-5.5.1.19]
 
* Synonym(s):
 
* Synonym(s):
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** 3-oxo-18:1-Δ9-CoA
 
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** 3-oxo-9-cis-octadecenoyl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-17777]]
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** 1 [[CPD1F-114]][c] '''=>''' 1 [[CPD1F-126]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 all-trans-lycopene[c] '''=>''' 1 γ-carotene[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-00_005850]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-07_007260]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-02_005510]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-00_005820]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-24_002150]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-24_002140]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-10_006240]]
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[PWY-5943]], β-carotene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5943 PWY-5943]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7591]], okenone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7591 PWY-7591]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: smiles=CCCCCCCCC=CCCCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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* RHEA:
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{{#set: inchi key=InChIKey=AVEYYKDEKGJVBU-BPMMELMSSA-J}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32222 32222]
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{{#set: common name=3-oxo-(9Z)-octadecenoyl-CoA}}
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* LIGAND-RXN:
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{{#set: molecular weight=1041.936    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R05341 R05341]
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{{#set: common name=3-oxo-18:1-Δ9-CoA|3-oxo-9-cis-octadecenoyl-CoA}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: produced by=RXN-17777}}
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{{#set: common name=lycopene beta cyclase}}
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{{#set: ec number=EC-5.5.1.19}}
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{{#set: gene associated=Ec-00_005850|Ec-07_007260|Ec-02_005510|Ec-00_005820|Ec-24_002150|Ec-24_002140|Ec-10_006240}}
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{{#set: in pathway=PWY-5943|PWY-7591}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:17, 21 March 2018

Reaction RXN1F-150

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • lycopene beta cyclase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 all-trans-lycopene[c] => 1 γ-carotene[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5943, β-carotene biosynthesis: PWY-5943
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7591, okenone biosynthesis: PWY-7591
    • 1 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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