Difference between revisions of "1.5.5.1-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2OXOGLUTARATEDEH-RXN 2OXOGLUTARATEDEH-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-oxo...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.5.1-RXN 1.5.5.1-RXN] == * direction: ** REVERSIBLE * common name: ** Electron transfer flavopro...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2OXOGLUTARATEDEH-RXN 2OXOGLUTARATEDEH-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.5.1-RXN 1.5.5.1-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** 2-oxoglutarate dehydrogenase complex
+
** Electron transfer flavoprotein-ubiquinone oxidoreductase
−
** dihydrolipoamide dehydrogenase
+
* ec number:
−
** 2-oxoglutarate dehydrogenase E1 component
+
** [http://enzyme.expasy.org/EC/1.5.5.1 EC-1.5.5.1]
 
* Synonym(s):
 
* Synonym(s):
−
** 2-oxoglutarate dehydrogenation
 
−
** α-ketoglutarate oxidative decarboxylation
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NAD]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[SUC-COA]][c]
+
** 1 [[Ubiquinones]][c] '''+''' 1 [[ETF-Reduced]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[Ubiquinols]][c] '''+''' 1 [[ETF-Oxidized]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD+[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 coenzyme A[c] '''=>''' 1 CO2[c] '''+''' 1 NADH[c] '''+''' 1 succinyl-CoA[c]
+
** 1 a ubiquinone[c] '''+''' 1 a reduced electron-transfer flavoprotein[c] '''<=>''' 1 H+[c] '''+''' 1 an ubiquinol[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-21_002300]]
+
* Gene: [[Ec-23_002110]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
−
* Gene: [[Ec-25_000020]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: AUTOMATED-NAME-MATCH
+
−
* Gene: [[Ec-27_004160]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7254]], TCA cycle VII (acetate-producers): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7254 PWY-7254]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[TCA]], TCA cycle I (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=TCA TCA]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-5690]], TCA cycle II (plants and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5690 PWY-5690]
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 40: Line 26:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27786 27786]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R08549 R08549]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04433 R04433]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=2-oxoglutarate dehydrogenase complex}}
+
{{#set: common name=Electron transfer flavoprotein-ubiquinone oxidoreductase}}
−
{{#set: common name=dihydrolipoamide dehydrogenase}}
+
{{#set: ec number=EC-1.5.5.1}}
−
{{#set: common name=2-oxoglutarate dehydrogenase E1 component}}
+
{{#set: gene associated=Ec-23_002110}}
−
{{#set: common name=2-oxoglutarate dehydrogenation|&alpha;-ketoglutarate oxidative decarboxylation}}
+
{{#set: in pathway=}}
−
{{#set: gene associated=Ec-21_002300|Ec-25_000020|Ec-27_004160}}
+
−
{{#set: in pathway=PWY-7254|TCA|PWY-5690}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:57, 21 March 2018

Reaction 1.5.5.1-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Electron transfer flavoprotein-ubiquinone oxidoreductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a ubiquinone[c] + 1 a reduced electron-transfer flavoprotein[c] <=> 1 H+[c] + 1 an ubiquinol[c] + 1 an oxidized electron-transfer flavoprotein[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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