Difference between revisions of "PPI"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7800 RXN-7800] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With id...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PPI PPI] == * smiles: ** O=P(O)(OP([O-])([O-])=O)[O-] * inchi key: ** InChIKey=XPPKVPWEQAFLFU-U...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7800 RXN-7800] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PPI PPI] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
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** O=P(O)(OP([O-])([O-])=O)[O-]
 +
* inchi key:
 +
** InChIKey=XPPKVPWEQAFLFU-UHFFFAOYSA-K
 +
* common name:
 +
** diphosphate
 +
* molecular weight:
 +
** 174.951   
 
* Synonym(s):
 
* Synonym(s):
 +
** PPi
 +
** PP
 +
** pyrophosphate
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
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* [[INORGPYROPHOSPHAT-RXN]]
−
** 1 [[PROTON]][c] '''+''' 1 [[CPD-7100]][c] '''=>''' 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
== Reaction(s) known to produce the compound ==
−
* With common name(s):
+
* [[ARGININE--TRNA-LIGASE-RXN]]
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** 1 H+[c] '''+''' 1 (2S)-2-isopropyl-3-oxosuccinate[c] '''=>''' 1 4-methyl-2-oxopentanoate[c] '''+''' 1 CO2[c]
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* [[RXN66-483]]
−
 
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* [[RXN66-480]]
−
== Genes associated with this reaction  ==
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* [[RXN0-7248]]
−
== Pathways  ==
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* [[RXN66-484]]
−
* [[LEUSYN-PWY]], L-leucine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=LEUSYN-PWY LEUSYN-PWY]
+
* [[RXN0-2023]]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[GMP-SYN-GLUT-RXN]]
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* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871]
+
* [[ACYLCOASYN-RXN]]
−
** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[2.7.7.30-RXN]]
−
== Reconstruction information  ==
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* [[ACETATE--COA-LIGASE-RXN]]
−
* [[annotation]]:
+
* [[RXN-1961]]
−
** [[pathwaytools]]:
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* [[ASPARTATE--TRNA-LIGASE-RXN]]
−
*** [[esiliculosus_genome]]
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* [[2.5.1.32-RXN]]
 +
* [[THI-P-SYN-RXN]]
 +
* [[ASNSYNB-RXN]]
 +
* [[HISTPRATPHYD-RXN]]
 +
* [[URACIL-PRIBOSYLTRANS-RXN]]
 +
* [[VALINE--TRNA-LIGASE-RXN]]
 +
* [[TRYPTOPHAN--TRNA-LIGASE-RXN]]
 +
* [[RXN-7904]]
 +
* [[RXN-16418]]
 +
* [[TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN]]
 +
* [[6.1.1.24-RXN]]
 +
* [[ASNSYNA-RXN]]
 +
* [[DNA-LIGASE-ATP-RXN]]
 +
* [[LYSINE--TRNA-LIGASE-RXN]]
 +
* [[RXN-8340]]
 +
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
 +
* [[RXN-7810]]
 +
* [[S-ADENMETSYN-RXN]]
 +
* [[PANTEPADENYLYLTRAN-RXN]]
 +
* [[RXN-9230]]
 +
* [[RXN-14139]]
 +
* [[RXN-9386]]
 +
* [[R223-RXN]]
 +
* [[RXN-9623]]
 +
* [[2.5.1.41-RXN]]
 +
* [[2.5.1.39-RXN]]
 +
* [[4-COUMARATE--COA-LIGASE-RXN]]
 +
* [[NAD-SYNTH-GLN-RXN]]
 +
* [[ASPARAGINE--TRNA-LIGASE-RXN]]
 +
* [[GLUTAMINE--TRNA-LIGASE-RXN]]
 +
* [[6.3.4.10-RXN]]
 +
* [[ARGSUCCINSYN-RXN]]
 +
* [[RXN-2001]]
 +
* [[RXN0-1602]]
 +
* [[THREONINE--TRNA-LIGASE-RXN]]
 +
* [[RXN-9003]]
 +
* [[METHIONINE--TRNA-LIGASE-RXN]]
 +
* [[GMP-SYN-NH3-RXN]]
 +
* [[ISOLEUCINE--TRNA-LIGASE-RXN]]
 +
* [[RXN66-281]]
 +
* [[NICONUCADENYLYLTRAN-RXN]]
 +
* [[2.7.7.15-RXN]]
 +
* [[RXN-4305]]
 +
* [[FADSYN-RXN]]
 +
* [[RXN-17573]]
 +
* [[ALANINE--TRNA-LIGASE-RXN]]
 +
* [[RXN-14140]]
 +
* [[DNA-DIRECTED-DNA-POLYMERASE-RXN]]
 +
* [[RXN0-7239]]
 +
* [[4OHBENZOATE-OCTAPRENYLTRANSFER-RXN]]
 +
* [[RXN-9644]]
 +
* [[GSADENYLATION-RXN]]
 +
* [[RXN0-7238]]
 +
* [[RXN-12720]]
 +
* [[RXN-9222]]
 +
* [[RXN-13724]]
 +
* [[ADENYLATECYC-RXN]]
 +
* [[PROLINE--TRNA-LIGASE-RXN]]
 +
* [[NAD-SYNTH-NH3-RXN]]
 +
* [[2.7.7.14-RXN]]
 +
* [[QUINOPRIBOTRANS-RXN]]
 +
* [[RXN-8344]]
 +
* [[RXN-1126]]
 +
* [[RXN-7813]]
 +
* [[RXN-7811]]
 +
* [[RXN-10919]]
 +
* [[RXN-16165]]
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* [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]]
 +
* [[FPPSYN-RXN]]
 +
* [[6.2.1.34-RXN]]
 +
* [[RXN0-5359]]
 +
* [[RXN-12056]]
 +
* [[FARNESYLTRANSTRANSFERASE-RXN]]
 +
* [[RXN66-477]]
 +
* [[HISTIDINE--TRNA-LIGASE-RXN]]
 +
* [[RXN66-474]]
 +
* [[RXN-12184]]
 +
* [[RXN-13290]]
 +
* [[RNA-LIGASE-ATP-RXN]]
 +
* [[TYROSINE--TRNA-LIGASE-RXN]]
 +
* [[MRNA-GUANYLYLTRANSFERASE-RXN]]
 +
* [[RXN1G-121]]
 +
* [[RXN-16393]]
 +
* [[RXN-12263]]
 +
* [[GTP-CYCLOHYDRO-II-RXN]]
 +
* [[TRANS-RXN0-623]]
 +
* [[H2PTEROATESYNTH-RXN]]
 +
* [[RXN0-1603]]
 +
* [[RXN0-5515]]
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* [[RXN-8999]]
 +
* [[RXN-16389]]
 +
* [[RXN-11361]]
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* [[NAG1P-URIDYLTRANS-RXN]]
 +
* [[RXNARA-8002]]
 +
* [[RXN-16401]]
 +
* [[RXN-16402]]
 +
* [[PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN]]
 +
* [[RXN66-469]]
 +
* [[SERINE--TRNA-LIGASE-RXN]]
 +
* [[LINOLENOYL-RXN]]
 +
* [[PANTOATE-BETA-ALANINE-LIG-RXN]]
 +
* [[2.7.7.60-RXN]]
 +
* [[RXN0-7192]]
 +
* [[RXN-16380]]
 +
* [[RNA-3-PHOSPHATE-CYCLASE-RXN]]
 +
* [[RXN-13162]]
 +
* [[ADENPRIBOSYLTRAN-RXN]]
 +
* [[RXN-9673]]
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* [[ACETOACETATE--COA-LIGASE-RXN]]
 +
* [[RXN-11486]]
 +
* [[CYSTEINE--TRNA-LIGASE-RXN]]
 +
* [[6.3.4.11-RXN]]
 +
* [[LEUCINE--TRNA-LIGASE-RXN]]
 +
* [[RXN-13614]]
 +
* [[GLYCINE--TRNA-LIGASE-RXN]]
 +
* [[PHENYLALANINE--TRNA-LIGASE-RXN]]
 +
* [[CDPDIGLYSYN-RXN]]
 +
* [[RXN-10]]
 +
* [[2.7.7.13-RXN]]
 +
* [[NICOTINATEPRIBOSYLTRANS-RXN]]
 +
* [[RXN-12978]]
 +
* [[RXN-2541]]
 +
* [[RXN-4303]]
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* [[6.3.4.9-RXN]]
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* [[BIOTINLIG-RXN]]
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* [[RXN0-2161]]
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* [[GLURS-RXN]]
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* [[RXN0-6382]]
 +
* [[DUTP-PYROP-RXN]]
 +
* [[RXN0-385]]
 +
* [[RXN0-6274]]
 +
== Reaction(s) of unknown directionality ==
 +
* [[RXN1F-144]]
 +
* [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
 +
* [[ATPPHOSPHORIBOSYLTRANS-RXN]]
 +
* [[RXN-3701]]
 +
* [[GUANYLCYC-RXN]]
 +
* [[TCX10]]
 +
* [[2.5.1.58-RXN]]
 +
* [[TCM3]]
 +
* [[RXN-13323]]
 +
* [[OROPRIBTRANS-RXN]]
 +
* [[RXN-12503]]
 +
* [[TCP26]]
 +
* [[SULFATE-ADENYLYLTRANS-RXN]]
 +
* [[RXN0-5180]]
 +
* [[RXN-14270]]
 +
* [[RXN-16415]]
 +
* [[HYPOXANPRIBOSYLTRAN-RXN]]
 +
* [[RNA-DIRECTED-RNA-POLYMERASE-RXN]]
 +
* [[PRTRANS-RXN]]
 +
* [[PRPPAMIDOTRANS-RXN]]
 +
* [[DNA-DIRECTED-RNA-POLYMERASE-RXN]]
 +
* [[RXN-11368]]
 +
* [[GUANPRIBOSYLTRAN-RXN]]
 +
* [[GLUC1PURIDYLTRANS-RXN]]
 +
* [[RXN-14569]]
 +
* [[GPPSYN-RXN]]
 +
* [[POLYNUCLEOTIDE-ADENYLYLTRANSFERASE-RXN]]
 +
* [[RXN-12502]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* CAS : 2466-09-3
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25078 25078]
+
* BIGG : 33511
−
* LIGAND-RXN:
+
* DRUGBANK : DB04160
−
** [http://www.genome.jp/dbget-bin/www_bget?R01652 R01652]
+
* PUBCHEM:
−
{{#set: direction=LEFT-TO-RIGHT}}
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=1023 1023]
−
{{#set: in pathway=LEUSYN-PWY|PWY-6871}}
+
* HMDB : HMDB00250
−
{{#set: reconstruction category=annotation}}
+
* LIGAND-CPD:
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.genome.jp/dbget-bin/www_bget?C00013 C00013]
−
{{#set: reconstruction source=esiliculosus_genome}}
+
* CHEMSPIDER:
 +
** [http://www.chemspider.com/Chemical-Structure.996.html 996]
 +
* CHEBI:
 +
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=29888 29888]
 +
* METABOLIGHTS : MTBLC33019
 +
{{#set: smiles=O=P(O)(OP([O-])([O-])=O)[O-]}}
 +
{{#set: inchi key=InChIKey=XPPKVPWEQAFLFU-UHFFFAOYSA-K}}
 +
{{#set: common name=diphosphate}}
 +
{{#set: molecular weight=174.951    }}
 +
{{#set: common name=PPi|PP|pyrophosphate}}
 +
{{#set: consumed by=INORGPYROPHOSPHAT-RXN}}
 +
{{#set: produced by=ARGININE--TRNA-LIGASE-RXN|RXN66-483|RXN66-480|RXN0-7248|RXN66-484|RXN0-2023|GMP-SYN-GLUT-RXN|ACYLCOASYN-RXN|2.7.7.30-RXN|ACETATE--COA-LIGASE-RXN|RXN-1961|ASPARTATE--TRNA-LIGASE-RXN|2.5.1.32-RXN|THI-P-SYN-RXN|ASNSYNB-RXN|HISTPRATPHYD-RXN|URACIL-PRIBOSYLTRANS-RXN|VALINE--TRNA-LIGASE-RXN|TRYPTOPHAN--TRNA-LIGASE-RXN|RXN-7904|RXN-16418|TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN|6.1.1.24-RXN|ASNSYNA-RXN|DNA-LIGASE-ATP-RXN|LYSINE--TRNA-LIGASE-RXN|RXN-8340|UBIQUITIN--PROTEIN-LIGASE-RXN|RXN-7810|S-ADENMETSYN-RXN|PANTEPADENYLYLTRAN-RXN|RXN-9230|RXN-14139|RXN-9386|R223-RXN|RXN-9623|2.5.1.41-RXN|2.5.1.39-RXN|4-COUMARATE--COA-LIGASE-RXN|NAD-SYNTH-GLN-RXN|ASPARAGINE--TRNA-LIGASE-RXN|GLUTAMINE--TRNA-LIGASE-RXN|6.3.4.10-RXN|ARGSUCCINSYN-RXN|RXN-2001|RXN0-1602|THREONINE--TRNA-LIGASE-RXN|RXN-9003|METHIONINE--TRNA-LIGASE-RXN|GMP-SYN-NH3-RXN|ISOLEUCINE--TRNA-LIGASE-RXN|RXN66-281|NICONUCADENYLYLTRAN-RXN|2.7.7.15-RXN|RXN-4305|FADSYN-RXN|RXN-17573|ALANINE--TRNA-LIGASE-RXN|RXN-14140|DNA-DIRECTED-DNA-POLYMERASE-RXN|RXN0-7239|4OHBENZOATE-OCTAPRENYLTRANSFER-RXN|RXN-9644|GSADENYLATION-RXN|RXN0-7238|RXN-12720|RXN-9222|RXN-13724|ADENYLATECYC-RXN|PROLINE--TRNA-LIGASE-RXN|NAD-SYNTH-NH3-RXN|2.7.7.14-RXN|QUINOPRIBOTRANS-RXN|RXN-8344|RXN-1126|RXN-7813|RXN-7811|RXN-10919|RXN-16165|H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN|FPPSYN-RXN|6.2.1.34-RXN|RXN0-5359|RXN-12056|FARNESYLTRANSTRANSFERASE-RXN|RXN66-477|HISTIDINE--TRNA-LIGASE-RXN|RXN66-474|RXN-12184|RXN-13290|RNA-LIGASE-ATP-RXN|TYROSINE--TRNA-LIGASE-RXN|MRNA-GUANYLYLTRANSFERASE-RXN|RXN1G-121|RXN-16393|RXN-12263|GTP-CYCLOHYDRO-II-RXN|TRANS-RXN0-623|H2PTEROATESYNTH-RXN|RXN0-1603|RXN0-5515|RXN-8999|RXN-16389|RXN-11361|NAG1P-URIDYLTRANS-RXN|RXNARA-8002|RXN-16401|RXN-16402|PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN|RXN66-469|SERINE--TRNA-LIGASE-RXN|LINOLENOYL-RXN|PANTOATE-BETA-ALANINE-LIG-RXN|2.7.7.60-RXN|RXN0-7192|RXN-16380|RNA-3-PHOSPHATE-CYCLASE-RXN|RXN-13162|ADENPRIBOSYLTRAN-RXN|RXN-9673|ACETOACETATE--COA-LIGASE-RXN|RXN-11486|CYSTEINE--TRNA-LIGASE-RXN|6.3.4.11-RXN|LEUCINE--TRNA-LIGASE-RXN|RXN-13614|GLYCINE--TRNA-LIGASE-RXN|PHENYLALANINE--TRNA-LIGASE-RXN|CDPDIGLYSYN-RXN|RXN-10|2.7.7.13-RXN|NICOTINATEPRIBOSYLTRANS-RXN|RXN-12978|RXN-2541|RXN-4303|6.3.4.9-RXN|BIOTINLIG-RXN|RXN0-2161|GLURS-RXN|RXN0-6382|DUTP-PYROP-RXN|RXN0-385|RXN0-6274}}
 +
{{#set: reversible reaction associated=RXN1F-144|RNA-DIRECTED-DNA-POLYMERASE-RXN|ATPPHOSPHORIBOSYLTRANS-RXN|RXN-3701|GUANYLCYC-RXN|TCX10|2.5.1.58-RXN|TCM3|RXN-13323|OROPRIBTRANS-RXN|RXN-12503|TCP26|SULFATE-ADENYLYLTRANS-RXN|RXN0-5180|RXN-14270|RXN-16415|HYPOXANPRIBOSYLTRAN-RXN|RNA-DIRECTED-RNA-POLYMERASE-RXN|PRTRANS-RXN|PRPPAMIDOTRANS-RXN|DNA-DIRECTED-RNA-POLYMERASE-RXN|RXN-11368|GUANPRIBOSYLTRAN-RXN|GLUC1PURIDYLTRANS-RXN|RXN-14569|GPPSYN-RXN|POLYNUCLEOTIDE-ADENYLYLTRANSFERASE-RXN|RXN-12502}}

Latest revision as of 19:19, 21 March 2018

Metabolite PPI

  • smiles:
    • O=P(O)(OP([O-])([O-])=O)[O-]
  • inchi key:
    • InChIKey=XPPKVPWEQAFLFU-UHFFFAOYSA-K
  • common name:
    • diphosphate
  • molecular weight:
    • 174.951
  • Synonym(s):
    • PPi
    • PP
    • pyrophosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 2466-09-3
  • BIGG : 33511
  • DRUGBANK : DB04160
  • PUBCHEM:
  • HMDB : HMDB00250
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC33019
"O=P(O)(OP([O-])([O-])=O)[O-" cannot be used as a page name in this wiki.




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