Difference between revisions of "DGMP"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINESYN-RXN GLUTAMINESYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Glutamine syn...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DGMP DGMP] == * smiles: ** C(OP(=O)([O-])[O-])C1(OC(CC(O)1)N3(C=NC2(C(=O)NC(N)=NC=23))) * inchi...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINESYN-RXN GLUTAMINESYN-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DGMP DGMP] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(OP(=O)([O-])[O-])C1(OC(CC(O)1)N3(C=NC2(C(=O)NC(N)=NC=23)))
 +
* inchi key:
 +
** InChIKey=LTFMZDNNPPEQNG-KVQBGUIXSA-L
 
* common name:
 
* common name:
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** Glutamine synthetase, beta-Grasp
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** dGMP
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** glutamate-ammonia ligase
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* molecular weight:
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** Glutamine synthetase/guanido kinase, catalytic domain
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** 345.208   
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* ec number:
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** [http://enzyme.expasy.org/EC/6.3.1.2 EC-6.3.1.2]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** G
 +
** 2'-dG-5'-MP
 +
** 2'-deoxyguanosine 5'-monophosphate
 +
** guanine riboside
 +
** vernine
 +
** 2'-deoxyguanosine 5'-phosphate
 +
** deoxyguanosine-phosphate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[GLT]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[AMMONIUM]][c] '''=>''' 1 [[GLN]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
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* [[RXN-14208]]
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* With common name(s):
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* [[RXN0-385]]
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** 1 L-glutamate[c] '''+''' 1 ATP[c] '''+''' 1 ammonium[c] '''=>''' 1 L-glutamine[c] '''+''' 1 phosphate[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
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== Reaction(s) of unknown directionality ==
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* [[RXN-14218]]
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== Genes associated with this reaction  ==
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−
Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-21_003610]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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** [[pantograph]]-[[aragem]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-09_000640]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-15_004110]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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** [[pantograph]]-[[aragem]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-15_004120]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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−
** [[pantograph]]-[[aragem]]
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** [[pantograph]]-[[aragem]]
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−
== Pathways  ==
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* [[GLNSYN-PWY]], L-glutamine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLNSYN-PWY GLNSYN-PWY]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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−
* [[PWY-5675]], nitrate reduction V (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5675 PWY-5675]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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−
* [[PWY-381]], nitrate reduction II (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-381 PWY-381]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6549]], L-glutamine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6549 PWY-6549]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6964]], ammonia assimilation cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6964 PWY-6964]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY490-3]], nitrate reduction VI (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-3 PWY490-3]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6963]], ammonia assimilation cycle I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6963 PWY-6963]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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−
== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[aragem]]
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−
* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* CAS : 902-04-5
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16169 16169]
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* BIGG : 34744
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R00253 R00253]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=6994968 6994968]
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* UNIPROT:
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* HMDB : HMDB01044
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** [http://www.uniprot.org/uniprot/P15103 P15103]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P15124 P15124]
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** [http://www.genome.jp/dbget-bin/www_bget?C00362 C00362]
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** [http://www.uniprot.org/uniprot/P15623 P15623]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P21154 P21154]
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** [http://www.chemspider.com/Chemical-Structure.5362940.html 5362940]
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** [http://www.uniprot.org/uniprot/P45627 P45627]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q59982 Q59982]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57673 57673]
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** [http://www.uniprot.org/uniprot/Q7M314 Q7M314]
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* METABOLIGHTS : MTBLC57673
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** [http://www.uniprot.org/uniprot/Q60182 Q60182]
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{{#set: smiles=C(OP(=O)([O-])[O-])C1(OC(CC(O)1)N3(C=NC2(C(=O)NC(N)=NC=23)))}}
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** [http://www.uniprot.org/uniprot/P04078 P04078]
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{{#set: inchi key=InChIKey=LTFMZDNNPPEQNG-KVQBGUIXSA-L}}
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** [http://www.uniprot.org/uniprot/P00964 P00964]
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{{#set: common name=dGMP}}
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** [http://www.uniprot.org/uniprot/P22248 P22248]
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{{#set: molecular weight=345.208    }}
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** [http://www.uniprot.org/uniprot/P07804 P07804]
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{{#set: common name=G|2'-dG-5'-MP|2'-deoxyguanosine 5'-monophosphate|guanine riboside|vernine|2'-deoxyguanosine 5'-phosphate|deoxyguanosine-phosphate}}
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** [http://www.uniprot.org/uniprot/P13564 P13564]
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{{#set: produced by=RXN-14208|RXN0-385}}
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** [http://www.uniprot.org/uniprot/P12425 P12425]
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{{#set: reversible reaction associated=RXN-14218}}
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** [http://www.uniprot.org/uniprot/P19064 P19064]
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** [http://www.uniprot.org/uniprot/P16580 P16580]
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** [http://www.uniprot.org/uniprot/P10656 P10656]
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** [http://www.uniprot.org/uniprot/P11600 P11600]
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** [http://www.uniprot.org/uniprot/P0A1P6 P0A1P6]
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** [http://www.uniprot.org/uniprot/P0A9C5 P0A9C5]
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** [http://www.uniprot.org/uniprot/P00965 P00965]
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** [http://www.uniprot.org/uniprot/P04771 P04771]
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** [http://www.uniprot.org/uniprot/P04770 P04770]
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** [http://www.uniprot.org/uniprot/P15102 P15102]
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** [http://www.uniprot.org/uniprot/P10583 P10583]
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** [http://www.uniprot.org/uniprot/P23712 P23712]
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** [http://www.uniprot.org/uniprot/P15105 P15105]
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** [http://www.uniprot.org/uniprot/P08282 P08282]
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** [http://www.uniprot.org/uniprot/P08281 P08281]
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** [http://www.uniprot.org/uniprot/P07694 P07694]
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** [http://www.uniprot.org/uniprot/P09606 P09606]
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** [http://www.uniprot.org/uniprot/P14654 P14654]
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** [http://www.uniprot.org/uniprot/P14655 P14655]
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** [http://www.uniprot.org/uniprot/P14656 P14656]
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** [http://www.uniprot.org/uniprot/P22878 P22878]
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** [http://www.uniprot.org/uniprot/P19432 P19432]
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** [http://www.uniprot.org/uniprot/P15106 P15106]
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** [http://www.uniprot.org/uniprot/P19904 P19904]
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** [http://www.uniprot.org/uniprot/P14636 P14636]
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** [http://www.uniprot.org/uniprot/P04772 P04772]
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** [http://www.uniprot.org/uniprot/P09826 P09826]
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** [http://www.uniprot.org/uniprot/P05457 P05457]
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** [http://www.uniprot.org/uniprot/Q9JSU6 Q9JSU6]
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** [http://www.uniprot.org/uniprot/Q9PPK8 Q9PPK8]
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** [http://www.uniprot.org/uniprot/O66514 O66514]
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** [http://www.uniprot.org/uniprot/Q8X7G0 Q8X7G0]
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** [http://www.uniprot.org/uniprot/Q9CDL9 Q9CDL9]
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** [http://www.uniprot.org/uniprot/Q05650 Q05650]
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** [http://www.uniprot.org/uniprot/P43794 P43794]
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** [http://www.uniprot.org/uniprot/P31592 P31592]
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** [http://www.uniprot.org/uniprot/Q27747 Q27747]
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** [http://www.uniprot.org/uniprot/P12424 P12424]
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** [http://www.uniprot.org/uniprot/Q04831 Q04831]
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** [http://www.uniprot.org/uniprot/P24099 P24099]
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** [http://www.uniprot.org/uniprot/O04998 O04998]
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** [http://www.uniprot.org/uniprot/O04999 O04999]
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** [http://www.uniprot.org/uniprot/P20479 P20479]
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** [http://www.uniprot.org/uniprot/O75014 O75014]
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** [http://www.uniprot.org/uniprot/P23794 P23794]
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** [http://www.uniprot.org/uniprot/Q43127 Q43127]
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** [http://www.uniprot.org/uniprot/Q9FHR0 Q9FHR0]
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** [http://www.uniprot.org/uniprot/Q9C8C7 Q9C8C7]
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** [http://www.uniprot.org/uniprot/P28786 P28786]
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** [http://www.uniprot.org/uniprot/Q02154 Q02154]
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** [http://www.uniprot.org/uniprot/Q05542 Q05542]
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** [http://www.uniprot.org/uniprot/Q42624 Q42624]
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** [http://www.uniprot.org/uniprot/P43518 P43518]
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** [http://www.uniprot.org/uniprot/P52783 P52783]
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** [http://www.uniprot.org/uniprot/Q43759 Q43759]
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** [http://www.uniprot.org/uniprot/P38559 P38559]
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** [http://www.uniprot.org/uniprot/P38560 P38560]
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** [http://www.uniprot.org/uniprot/P38561 P38561]
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** [http://www.uniprot.org/uniprot/P38562 P38562]
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** [http://www.uniprot.org/uniprot/P38563 P38563]
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** [http://www.uniprot.org/uniprot/P25462 P25462]
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** [http://www.uniprot.org/uniprot/Q42625 Q42625]
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** [http://www.uniprot.org/uniprot/P46410 P46410]
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** [http://www.uniprot.org/uniprot/Q42802 Q42802]
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** [http://www.uniprot.org/uniprot/Q42623 Q42623]
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** [http://www.uniprot.org/uniprot/Q53045 Q53045]
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** [http://www.uniprot.org/uniprot/P32288 P32288]
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** [http://www.uniprot.org/uniprot/Q43066 Q43066]
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** [http://www.uniprot.org/uniprot/Q59195 Q59195]
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** [http://www.uniprot.org/uniprot/P51118 P51118]
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** [http://www.uniprot.org/uniprot/P51119 P51119]
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** [http://www.uniprot.org/uniprot/Q42950 Q42950]
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** [http://www.uniprot.org/uniprot/Q42951 Q42951]
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** [http://www.uniprot.org/uniprot/Q07939 Q07939]
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** [http://www.uniprot.org/uniprot/Q43760 Q43760]
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** [http://www.uniprot.org/uniprot/Q42688 Q42688]
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** [http://www.uniprot.org/uniprot/Q42689 Q42689]
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** [http://www.uniprot.org/uniprot/O22504 O22504]
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** [http://www.uniprot.org/uniprot/O22505 O22505]
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** [http://www.uniprot.org/uniprot/O22506 O22506]
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** [http://www.uniprot.org/uniprot/Q59972 Q59972]
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** [http://www.uniprot.org/uniprot/Q9UWN1 Q9UWN1]
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** [http://www.uniprot.org/uniprot/Q9RDW7 Q9RDW7]
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** [http://www.uniprot.org/uniprot/P43386 P43386]
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** [http://www.uniprot.org/uniprot/P0A040 P0A040]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Glutamine synthetase, beta-Grasp}}
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{{#set: common name=glutamate-ammonia ligase}}
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{{#set: common name=Glutamine synthetase/guanido kinase, catalytic domain}}
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{{#set: ec number=EC-6.3.1.2}}
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{{#set: gene associated=Ec-21_003610|Ec-09_000640|Ec-15_004110|Ec-15_004120}}
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{{#set: in pathway=GLNSYN-PWY|PWY-5675|PWY-381|PWY-6549|PWY-6964|PWY490-3|PWY-6963}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aragem}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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−
{{#set: reconstruction source=esiliculosus_genome}}
+

Latest revision as of 19:19, 21 March 2018

Metabolite DGMP

  • smiles:
    • C(OP(=O)([O-])[O-])C1(OC(CC(O)1)N3(C=NC2(C(=O)NC(N)=NC=23)))
  • inchi key:
    • InChIKey=LTFMZDNNPPEQNG-KVQBGUIXSA-L
  • common name:
    • dGMP
  • molecular weight:
    • 345.208
  • Synonym(s):
    • G
    • 2'-dG-5'-MP
    • 2'-deoxyguanosine 5'-monophosphate
    • guanine riboside
    • vernine
    • 2'-deoxyguanosine 5'-phosphate
    • deoxyguanosine-phosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 902-04-5
  • BIGG : 34744
  • PUBCHEM:
  • HMDB : HMDB01044
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC57673
"C(OP(=O)([O-])[O-])C1(OC(CC(O)1)N3(C=NC2(C(=O)NC(N)=NC=23)))" cannot be used as a page name in this wiki.




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