Difference between revisions of "Ec-21 001850"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.149-RXN 2.4.1.149-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
 
(Created page with "Category:Gene == Gene Ec-21_001850 == * left end position: ** 2928730 * transcription direction: ** POSITIVE * right end position: ** 2931739 * centisome position: ** 39.6...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.149-RXN 2.4.1.149-RXN] ==
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== Gene Ec-21_001850 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2928730
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.4.1.149 EC-2.4.1.149]
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** POSITIVE
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* right end position:
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** 2931739
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* centisome position:
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** 39.684048   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0147_0062
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** Esi0147_0062
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.1.1.145-RXN]]
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** 1 [[B-Gal-14-NacGlc-R]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[N-ACETYL-BETA-D-GLUCOSAMINYL-13-ETCETERA]][c] '''+''' 1 [[UDP]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 β-D-galactosyl-(1→4)-N-acetyl-β-D-glucosaminyl-R[c] '''+''' 1 UDP-N-acetyl-α-D-glucosamine[c] '''=>''' 1 H+[c] '''+''' 1 N-acetyl-β-D-glucosaminyl-1,3-β-D-galactosyl-1,4-N-acetyl-β-D-glucosaminyl-R[c] '''+''' 1 UDP[c]
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* Reaction: [[1.1.1.170-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[RXN-12693]]
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* [[PWY-7434]], terminal O-glycans residues modification: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7434 PWY-7434]
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** Source: [[annotation-esiliculosus_genome]]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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*** Assignment: go-term
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== Reconstruction information  ==
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* Reaction: [[RXN-12747]]
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* [[annotation]]:
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** Source: [[annotation-esiliculosus_genome]]
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** [[pathwaytools]]:
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*** Assignment: go-term
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*** [[esiliculosus_genome]]
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* Reaction: [[RXN-12789]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN-13926]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-18]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-23]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-313]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN66-318]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY66-341]]
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* [[PWY-6074]]
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* [[PWY66-3]]
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* [[PWY-6946]]
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* [[PWY-6944]]
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* [[PWY66-4]]
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* [[PWY-6948]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2928730}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14389 14389]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2931739}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02789 R02789]
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{{#set: centisome position=39.684048    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0147_0062|Esi0147_0062}}
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{{#set: ec number=EC-2.4.1.149}}
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{{#set: reaction associated=1.1.1.145-RXN|1.1.1.170-RXN|RXN-12693|RXN-12747|RXN-12789|RXN-13926|RXN66-18|RXN66-23|RXN66-313|RXN66-318}}
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{{#set: in pathway=PWY-7434}}
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{{#set: pathway associated=PWY66-341|PWY-6074|PWY66-3|PWY-6946|PWY-6944|PWY66-4|PWY-6948}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:19, 21 March 2018

Gene Ec-21_001850

  • left end position:
    • 2928730
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2931739
  • centisome position:
    • 39.684048
  • Synonym(s):
    • Esi_0147_0062
    • Esi0147_0062

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-21_001850&oldid=26137"