Difference between revisions of "TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRIACYLGLYCEROL-LIPASE-RXN TRIACYLGLYCEROL-LIPASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN] == * direction: ** LEFT-TO-RIG...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
− | ** | + | ** pseudouridine synthase |
− | ** | + | ** Pseudouridine synthase I, TruA, C-terminal |
* ec number: | * ec number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/5.4.99.12 EC-5.4.99.12] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ | + | ** 1 [[tRNA-uridine-38-40]][c] '''=>''' 1 [[tRNA-pseudouridine-38-40]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 a | + | ** 1 a uridine38-40 in tRNA[c] '''=>''' 1 a pseudouridine38-40 in tRNA[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * [[Ec- | + | * Gene: [[Ec-05_002890]] |
− | ** | + | ** Source: [[annotation-esiliculosus_genome]] |
− | ***GO-TERM | + | *** Assignment: GO-TERM |
− | * [[Ec- | + | * Gene: [[Ec-22_001870]] |
− | ** | + | ** Source: [[annotation-esiliculosus_genome]] |
− | ***GO-TERM | + | *** Assignment: GO-TERM |
− | * [[Ec- | + | * Gene: [[Ec-28_003620]] |
− | ** | + | ** Source: [[annotation-esiliculosus_genome]] |
− | ***GO-TERM | + | *** Assignment: GO-TERM |
− | * [[Ec- | + | * Gene: [[Ec-14_000160]] |
− | ** | + | ** Source: [[annotation-esiliculosus_genome]] |
− | ***GO-TERM | + | *** Assignment: GO-TERM |
− | * [[Ec- | + | * Gene: [[Ec-07_000310]] |
− | ** | + | ** Source: [[annotation-esiliculosus_genome]] |
− | ***GO-TERM | + | *** Assignment: GO-TERM |
− | * [[Ec- | + | * Gene: [[Ec-27_004410]] |
− | ** | + | ** Source: [[annotation-esiliculosus_genome]] |
− | ***GO-TERM | + | *** Assignment: EC-NUMBER |
− | * [[Ec- | + | * Gene: [[Ec-07_006750]] |
− | ** | + | ** Source: [[annotation-esiliculosus_genome]] |
− | ***GO-TERM | + | *** Assignment: GO-TERM |
− | * [[Ec- | + | * Gene: [[Ec-26_004180]] |
− | ** | + | ** Source: [[annotation-esiliculosus_genome]] |
− | ***GO-TERM | + | *** Assignment: GO-TERM |
− | * [[Ec- | + | * Gene: [[Ec-01_000690]] |
− | ** | + | ** Source: [[annotation-esiliculosus_genome]] |
− | ***GO-TERM | + | *** Assignment: GO-TERM |
− | * [[Ec- | + | * Gene: [[Ec-27_005240]] |
− | ** | + | ** Source: [[annotation-esiliculosus_genome]] |
− | *** | + | *** Assignment: GO-TERM |
− | * [[Ec- | + | * Gene: [[Ec-06_009680]] |
− | ** | + | ** Source: [[annotation-esiliculosus_genome]] |
− | ***GO-TERM | + | *** Assignment: GO-TERM |
− | * [[Ec- | + | * Gene: [[Ec-09_003890]] |
− | ** | + | ** Source: [[annotation-esiliculosus_genome]] |
− | ***GO-TERM | + | *** Assignment: GO-TERM |
− | * [[Ec- | + | * Gene: [[Ec-14_001350]] |
− | ** | + | ** Source: [[annotation-esiliculosus_genome]] |
− | ***GO-TERM | + | *** Assignment: GO-TERM |
− | * [[Ec- | + | * Gene: [[Ec-08_003150]] |
− | ** | + | ** Source: [[annotation-esiliculosus_genome]] |
− | ***GO-TERM | + | *** Assignment: GO-TERM |
− | * [[Ec- | + | * Gene: [[Ec-14_001540]] |
− | ** | + | ** Source: [[annotation-esiliculosus_genome]] |
− | ***GO-TERM | + | *** Assignment: GO-TERM |
− | * [[Ec- | + | * Gene: [[Ec-14_001340]] |
− | ** | + | ** Source: [[annotation-esiliculosus_genome]] |
− | ***GO-TERM | + | *** Assignment: GO-TERM |
− | * [[Ec- | + | * Gene: [[Ec-06_003220]] |
− | ** | + | ** Source: [[annotation-esiliculosus_genome]] |
− | ***GO-TERM | + | *** Assignment: GO-TERM |
− | * [[Ec- | + | * Gene: [[Ec-20_000700]] |
− | ** | + | ** Source: [[annotation-esiliculosus_genome]] |
− | ***GO-TERM | + | *** Assignment: GO-TERM |
− | * [[Ec- | + | * Gene: [[Ec-04_001540]] |
− | ** | + | ** Source: [[annotation-esiliculosus_genome]] |
− | ***GO-TERM | + | *** Assignment: GO-TERM |
+ | * Gene: [[Ec-06_004490]] | ||
+ | ** Source: [[annotation-esiliculosus_genome]] | ||
+ | *** Assignment: GO-TERM | ||
+ | * Gene: [[Ec-17_003530]] | ||
+ | ** Source: [[annotation-esiliculosus_genome]] | ||
+ | *** Assignment: GO-TERM | ||
+ | * Gene: [[Ec-21_005910]] | ||
+ | ** Source: [[annotation-esiliculosus_genome]] | ||
+ | *** Assignment: GO-TERM | ||
+ | * Gene: [[Ec-20_003420]] | ||
+ | ** Source: [[annotation-esiliculosus_genome]] | ||
+ | *** Assignment: GO-TERM | ||
+ | * Gene: [[Ec-19_003680]] | ||
+ | ** Source: [[annotation-esiliculosus_genome]] | ||
+ | *** Assignment: GO-TERM | ||
+ | * Gene: [[Ec-01_008790]] | ||
+ | ** Source: [[annotation-esiliculosus_genome]] | ||
+ | *** Assignment: GO-TERM | ||
== Pathways == | == Pathways == | ||
− | |||
− | |||
== Reconstruction information == | == Reconstruction information == | ||
− | * [[annotation]] | + | * Category: [[annotation]] |
− | ** [[ | + | ** Source: [[annotation-esiliculosus_genome]] |
− | *** [[ | + | *** Tool: [[pathwaytools]] |
== External links == | == External links == | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R03020 R03020] |
* UNIPROT: | * UNIPROT: | ||
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q59069 Q59069] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P47428 P47428] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P45291 P45291] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q45557 Q45557] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q50291 Q50291] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P53167 P53167] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q12211 Q12211] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P73295 P73295] |
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/P07649 P07649] |
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{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
− | {{#set: common name= | + | {{#set: common name=pseudouridine synthase}} |
− | {{#set: common name= | + | {{#set: common name=Pseudouridine synthase I, TruA, C-terminal}} |
− | {{#set: ec number=EC- | + | {{#set: ec number=EC-5.4.99.12}} |
− | {{#set: gene associated=Ec- | + | {{#set: gene associated=Ec-05_002890|Ec-22_001870|Ec-28_003620|Ec-14_000160|Ec-07_000310|Ec-27_004410|Ec-07_006750|Ec-26_004180|Ec-01_000690|Ec-27_005240|Ec-06_009680|Ec-09_003890|Ec-14_001350|Ec-08_003150|Ec-14_001540|Ec-14_001340|Ec-06_003220|Ec-20_000700|Ec-04_001540|Ec-06_004490|Ec-17_003530|Ec-21_005910|Ec-20_003420|Ec-19_003680|Ec-01_008790}} |
− | {{#set: in pathway= | + | {{#set: in pathway=}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
+ | {{#set: reconstruction source=annotation-esiliculosus_genome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
− |
Latest revision as of 19:20, 21 March 2018
Contents
Reaction TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- pseudouridine synthase
- Pseudouridine synthase I, TruA, C-terminal
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 tRNA-uridine-38-40[c] => 1 tRNA-pseudouridine-38-40[c]
- With common name(s):
- 1 a uridine38-40 in tRNA[c] => 1 a pseudouridine38-40 in tRNA[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Ec-05_002890
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-22_001870
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-28_003620
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-14_000160
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-07_000310
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-27_004410
- Source: annotation-esiliculosus_genome
- Assignment: EC-NUMBER
- Source: annotation-esiliculosus_genome
- Gene: Ec-07_006750
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-26_004180
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-01_000690
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-27_005240
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-06_009680
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-09_003890
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-14_001350
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-08_003150
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-14_001540
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-14_001340
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-06_003220
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-20_000700
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-04_001540
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-06_004490
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-17_003530
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-21_005910
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-20_003420
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-19_003680
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-01_008790
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
Pathways
Reconstruction information
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
External links