Difference between revisions of "URACIL"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN] == * direction: ** LEFT-TO-RIG...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=URACIL URACIL] == * smiles: ** C1(=CC(NC(=O)N1)=O) * inchi key: ** InChIKey=ISAKRJDGNUQOIC-UHFF...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=URACIL URACIL] ==
* direction:
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* smiles:
** LEFT-TO-RIGHT
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** C1(=CC(NC(=O)N1)=O)
 +
* inchi key:
 +
** InChIKey=ISAKRJDGNUQOIC-UHFFFAOYSA-N
 
* common name:
 
* common name:
** pseudouridine synthase
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** uracil
** Pseudouridine synthase I, TruA, C-terminal
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* molecular weight:
* ec number:
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** 112.088   
** [http://enzyme.expasy.org/EC/5.4.99.12 EC-5.4.99.12]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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* [[URACIL-PRIBOSYLTRANS-RXN]]
** 1 [[tRNA-uridine-38-40]][c] '''=>''' 1 [[tRNA-pseudouridine-38-40]][c]
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== Reaction(s) known to produce the compound ==
* With common name(s):
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== Reaction(s) of unknown directionality ==
** 1 a uridine38-40 in tRNA[c] '''=>''' 1 a pseudouridine38-40 in tRNA[c]
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* [[RXN0-5398]]
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-08_003150]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-09_003890]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-28_003620]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-14_001350]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-07_006750]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-06_009680]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-01_000690]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-17_003530]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-21_005910]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-06_004490]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-07_000310]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-01_008790]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-06_003220]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-27_005240]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-20_000700]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-14_001540]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-04_001540]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-19_003680]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-20_003420]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-27_004410]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-22_001870]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-26_004180]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-14_001340]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-14_000160]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-05_002890]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways  ==
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
* LIGAND-RXN:
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* CAS : 66-22-8
** [http://www.genome.jp/dbget-bin/www_bget?R03020 R03020]
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* BIGG : 33879
* UNIPROT:
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* DRUGBANK : DB03419
** [http://www.uniprot.org/uniprot/Q59069 Q59069]
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* PUBCHEM:
** [http://www.uniprot.org/uniprot/P47428 P47428]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=1174 1174]
** [http://www.uniprot.org/uniprot/P45291 P45291]
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* HMDB : HMDB00300
** [http://www.uniprot.org/uniprot/Q45557 Q45557]
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* LIGAND-CPD:
** [http://www.uniprot.org/uniprot/Q50291 Q50291]
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** [http://www.genome.jp/dbget-bin/www_bget?C00106 C00106]
** [http://www.uniprot.org/uniprot/P53167 P53167]
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* CHEMSPIDER:
** [http://www.uniprot.org/uniprot/Q12211 Q12211]
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** [http://www.chemspider.com/Chemical-Structure.1141.html 1141]
** [http://www.uniprot.org/uniprot/P73295 P73295]
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* CHEBI:
** [http://www.uniprot.org/uniprot/P07649 P07649]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17568 17568]
{{#set: direction=LEFT-TO-RIGHT}}
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* METABOLIGHTS : MTBLC17568
{{#set: common name=pseudouridine synthase}}
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{{#set: smiles=C1(=CC(NC(=O)N1)=O)}}
{{#set: common name=Pseudouridine synthase I, TruA, C-terminal}}
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{{#set: inchi key=InChIKey=ISAKRJDGNUQOIC-UHFFFAOYSA-N}}
{{#set: ec number=EC-5.4.99.12}}
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{{#set: common name=uracil}}
{{#set: gene associated=Ec-08_003150|Ec-09_003890|Ec-28_003620|Ec-14_001350|Ec-07_006750|Ec-06_009680|Ec-01_000690|Ec-17_003530|Ec-21_005910|Ec-06_004490|Ec-07_000310|Ec-01_008790|Ec-06_003220|Ec-27_005240|Ec-20_000700|Ec-14_001540|Ec-04_001540|Ec-19_003680|Ec-20_003420|Ec-27_004410|Ec-22_001870|Ec-26_004180|Ec-14_001340|Ec-14_000160|Ec-05_002890}}
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{{#set: molecular weight=112.088    }}
{{#set: in pathway=}}
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{{#set: consumed by=URACIL-PRIBOSYLTRANS-RXN}}
{{#set: reconstruction category=annotation}}
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{{#set: reversible reaction associated=RXN0-5398}}
{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:20, 21 March 2018

Metabolite URACIL

  • smiles:
    • C1(=CC(NC(=O)N1)=O)
  • inchi key:
    • InChIKey=ISAKRJDGNUQOIC-UHFFFAOYSA-N
  • common name:
    • uracil
  • molecular weight:
    • 112.088
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 66-22-8
  • BIGG : 33879
  • DRUGBANK : DB03419
  • PUBCHEM:
  • HMDB : HMDB00300
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC17568