Difference between revisions of "RXN-1961"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMINEPHEN-RXN AMINEPHEN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** primary amine oxida...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1961 RXN-1961] == * direction: ** LEFT-TO-RIGHT * common name: ** tRNA(Ile)-lysidine/2-thiocyti...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMINEPHEN-RXN AMINEPHEN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1961 RXN-1961] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** primary amine oxidase
+
** tRNA(Ile)-lysidine/2-thiocytidine synthase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.4.3.21 EC-1.4.3.21]
+
** [http://enzyme.expasy.org/EC/6.3.4.19 EC-6.3.4.19]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PHENYLETHYLAMINE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[PHENYLACETALDEHYDE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
+
** 1 [[Cytidine-34-tRNAIle2]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[LYS]][c] '''=>''' 1 [[Lysidine-tRNA-Ile2]][c] '''+''' 1 [[PPI]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[AMP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 2-phenylethylamine[c] '''+''' 1 H2O[c] '''+''' 1 oxygen[c] '''=>''' 1 ammonium[c] '''+''' 1 phenylacetaldehyde[c] '''+''' 1 hydrogen peroxide[c]
+
** 1 a cytidine34 in tRNAIle2[c] '''+''' 1 ATP[c] '''+''' 1 L-lysine[c] '''=>''' 1 a lysidine34 in tRNAIle2[c] '''+''' 1 diphosphate[c] '''+''' 2 H+[c] '''+''' 1 AMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-15_002920]]
+
* Gene: [[Ec-00_002670]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-15_002910]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
** [[pantograph]]-[[aragem]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[2PHENDEG-PWY]], phenylethylamine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=2PHENDEG-PWY 2PHENDEG-PWY]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5751]], phenylethanol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5751 PWY-5751]
 
−
** '''1''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[aragem]]
+
*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25265 25265]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02613 R02613]
+
** [http://www.genome.jp/dbget-bin/www_bget?R09597 R09597]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=primary amine oxidase}}
+
{{#set: common name=tRNA(Ile)-lysidine/2-thiocytidine synthase}}
−
{{#set: ec number=EC-1.4.3.21}}
+
{{#set: ec number=EC-6.3.4.19}}
−
{{#set: gene associated=Ec-15_002920|Ec-15_002910}}
+
{{#set: gene associated=Ec-00_002670}}
−
{{#set: in pathway=2PHENDEG-PWY|PWY-5751}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=aragem}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 19:20, 21 March 2018

Reaction RXN-1961

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • tRNA(Ile)-lysidine/2-thiocytidine synthase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a cytidine34 in tRNAIle2[c] + 1 ATP[c] + 1 L-lysine[c] => 1 a lysidine34 in tRNAIle2[c] + 1 diphosphate[c] + 2 H+[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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