Difference between revisions of "RXN-2562"

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(Created page with "Category:Gene == Gene Ec-06_004620 == * left end position: ** 3989634 * transcription direction: ** POSITIVE * right end position: ** 4001746 * centisome position: ** 45.5...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2562 RXN-2562] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
 
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[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Ec-06_004620 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2562 RXN-2562] ==
* left end position:
+
* direction:
** 3989634
+
** LEFT-TO-RIGHT
* transcription direction:
+
* ec number:
** POSITIVE
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** [http://enzyme.expasy.org/EC/2.1.1.95 EC-2.1.1.95]
* right end position:
+
** 4001746
+
* centisome position:
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** 45.555428   
+
 
* Synonym(s):
 
* Synonym(s):
** Esi_0062_0016
 
** Esi0062_0016
 
  
== Reactions associated ==
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== Reaction Formula ==
* [[ENTDB-RXN]]
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* With identifiers:
** esiliculosus_genome
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[DELTA-TOCOPHEROL]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[BETA-TOCOPHEROL]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
***go-term
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* With common name(s):
* [[HOLO-ACP-SYNTH-RXN]]
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 δ-tocopherol[c] '''=>''' 1 H+[c] '''+''' 1 β-tocopherol[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
** esiliculosus_genome
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***go-term
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== Genes associated with this reaction  ==
* [[RXN-10994]]
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Genes have been associated with this reaction based on different elements listed below.
** esiliculosus_genome
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* Gene: [[Ec-18_000910]]
***go-term
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** Source: [[orthology-aragem]]
* [[RXN-15889]]
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== Pathways  ==
** esiliculosus_genome
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* [[PWY-1422]], vitamin E biosynthesis (tocopherols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1422 PWY-1422]
***go-term
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** '''7''' reactions found over '''7''' reactions in the full pathway
* [[RXN-16759]]
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== Reconstruction information  ==
** esiliculosus_genome
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* Category: [[orthology]]
***go-term
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** Source: [[orthology-aragem]]
== Pathways associated ==
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*** Tool: [[pantograph]]
* [[ENTBACSYN-PWY]]
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* Category: [[annotation]]
* [[PWY-6012]]
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** Source: [[annotation-esiliculosus_genome]]
* [[PWY-6012-1]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=3989634}}
+
* LIGAND-RXN:
{{#set: transcription direction=POSITIVE}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R07504 R07504]
{{#set: right end position=4001746}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: centisome position=45.555428    }}
+
{{#set: ec number=EC-2.1.1.95}}
{{#set: common name=Esi_0062_0016|Esi0062_0016}}
+
{{#set: gene associated=Ec-18_000910}}
{{#set: reaction associated=ENTDB-RXN|HOLO-ACP-SYNTH-RXN|RXN-10994|RXN-15889|RXN-16759}}
+
{{#set: in pathway=PWY-1422}}
{{#set: pathway associated=ENTBACSYN-PWY|PWY-6012|PWY-6012-1}}
+
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:21, 21 March 2018

Reaction RXN-2562

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-1422, vitamin E biosynthesis (tocopherols): PWY-1422
    • 7 reactions found over 7 reactions in the full pathway

Reconstruction information

External links