Difference between revisions of "Ec-11 000960"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.7.4-RXN 1.3.7.4-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org...")
 
(Created page with "Category:Gene == Gene Ec-11_000960 == * left end position: ** 1062400 * transcription direction: ** NEGATIVE * right end position: ** 1066151 * centisome position: ** 16.8...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.7.4-RXN 1.3.7.4-RXN] ==
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== Gene Ec-11_000960 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1062400
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.3.7.4 EC-1.3.7.4]
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** NEGATIVE
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* right end position:
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** 1066151
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* centisome position:
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** 16.89122   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0102_0065
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** Esi0102_0065
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** PGDH, frag
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PGLYCDEHYDROG-RXN]]
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** 2 [[Reduced-ferredoxins]][c] '''+''' 1 [[BILIVERDINE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[3Z-PHYTOCHROMOBILIN]][c] '''+''' 2 [[Oxidized-ferredoxins]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 1 biliverdin-IX-α[c] '''+''' 2 H+[c] '''=>''' 1 (3Z)-phytochromobilin[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c]
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== Pathways associated ==
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* [[SERSYN-PWY]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-22_000060]]
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** [[pantograph]]-[[aragem]]
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== Pathways ==
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* [[PWY-7170]], phytochromobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7170 PWY-7170]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[aragem]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=1062400}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03678 R03678]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=1066151}}
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{{#set: ec number=EC-1.3.7.4}}
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{{#set: centisome position=16.89122    }}
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{{#set: gene associated=Ec-22_000060}}
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{{#set: common name=Esi_0102_0065|Esi0102_0065|PGDH, frag}}
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{{#set: in pathway=PWY-7170}}
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{{#set: reaction associated=PGLYCDEHYDROG-RXN}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=SERSYN-PWY}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aragem}}
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Latest revision as of 20:01, 21 March 2018

Gene Ec-11_000960

  • left end position:
    • 1062400
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 1066151
  • centisome position:
    • 16.89122
  • Synonym(s):
    • Esi_0102_0065
    • Esi0102_0065
    • PGDH, frag

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-11_000960&oldid=23898"