Difference between revisions of "RXN-11519"

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(Created page with "Category:Gene == Gene Ec-27_003130 == * left end position: ** 2745580 * transcription direction: ** POSITIVE * right end position: ** 2757814 * centisome position: ** 42.5...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11519 RXN-11519] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Ec-27_003130 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11519 RXN-11519] ==
* left end position:
+
* direction:
** 2745580
+
** LEFT-TO-RIGHT
* transcription direction:
+
** POSITIVE
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* right end position:
+
** 2757814
+
* centisome position:
+
** 42.567745   
+
 
* Synonym(s):
 
* Synonym(s):
** Esi_0000_0583
 
** Esi0000_0583
 
** CM-PDT-PDH
 
  
== Reactions associated ==
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== Reaction Formula ==
* [[CHORISMATEMUT-RXN]]
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* With identifiers:
** esiliculosus_genome
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** 1 [[WATER]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[3-7-DIMETHYLXANTHINE]][c] '''=>''' 1 [[CPD-12482]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
***automated-name-match
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* With common name(s):
* [[PREPHENATEDEHYDRAT-RXN]]
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** 1 H2O[c] '''+''' 1 oxygen[c] '''+''' 1 theobromine[c] '''=>''' 1 3,7-dimethylurate[c] '''+''' 1 hydrogen peroxide[c]
** esiliculosus_genome
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***go-term
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== Genes associated with this reaction  ==
== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
* [[PHESYN]]
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* Gene: [[Ec-20_000230]]
* [[PWY-6120]]
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** Source: [[orthology-aragem]]
* [[PWY-3462]]
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* Gene: [[Ec-20_000210]]
* [[PWY-3461]]
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** Source: [[orthology-aragem]]
* [[PWY-7626]]
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== Pathways  ==
* [[PWY-7432]]
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* [[PWY-6632]], caffeine degradation IV (bacteria, via demethylation and oxidation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6632 PWY-6632]
* [[TYRSYN]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
* [[PWY-6627]]
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== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=2745580}}
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* LIGAND-RXN:
{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07978 R07978]
{{#set: right end position=2757814}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: centisome position=42.567745    }}
+
{{#set: gene associated=Ec-20_000230|Ec-20_000210}}
{{#set: common name=Esi_0000_0583|Esi0000_0583|CM-PDT-PDH}}
+
{{#set: in pathway=PWY-6632}}
{{#set: reaction associated=CHORISMATEMUT-RXN|PREPHENATEDEHYDRAT-RXN}}
+
{{#set: reconstruction category=orthology}}
{{#set: pathway associated=PHESYN|PWY-6120|PWY-3462|PWY-3461|PWY-7626|PWY-7432|TYRSYN|PWY-6627}}
+
{{#set: reconstruction source=orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:22, 21 March 2018

Reaction RXN-11519

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6632, caffeine degradation IV (bacteria, via demethylation and oxidation): PWY-6632
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links