Difference between revisions of "RXN-8443"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Plastocyanin-Reduced Plastocyanin-Reduced] == * common name: ** a reduced plastocyanin * Synony...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8443 RXN-8443] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
 
(2 intermediate revisions by the same user not shown)
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−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Plastocyanin-Reduced Plastocyanin-Reduced] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8443 RXN-8443] ==
−
* common name:
+
* direction:
−
** a reduced plastocyanin
+
** LEFT-TO-RIGHT
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.7.1.173 EC-2.7.1.173]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
* [[PLASTOQUINOL--PLASTOCYANIN-REDUCTASE-RXN]]
+
** 1 [[ATP]][c] '''+''' 1 [[CPD-8259]][c] '''=>''' 1 [[NICOTINATE_NUCLEOTIDE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
−
* [[RXN-12647]]
+
* With common name(s):
−
== Reaction(s) of unknown directionality ==
+
** 1 ATP[c] '''+''' 1 β-D-ribosylnicotinate[c] '''=>''' 1 β-nicotinate D-ribonucleotide[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-20_001460]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-10_004370]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-01_003040]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-01_005280]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-20_004730]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-02_003160]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-13_004630]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-03_001800]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-13_004480]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-17_001910]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-13_004470]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-03_000730]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-23_000730]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-13_004620]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-03_000710]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-06_010590]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-21_005740]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-25_000800]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-16_003140]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-00_007610]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-25_002150]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-27_003090]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-13_004810]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-20_002410]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-25_000050]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-15_004730]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-01_002500]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-03_005360]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-18_001430]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-20_003730]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-04_001940]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-18_002880]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-02_003690]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-10_000810]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-06_001940]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-04_004550]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-08_006680]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-13_004490]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-04_000460]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-03_000720]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-11_000030]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-14_002550]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-18_001580]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-19_003770]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-04_002300]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-18_001480]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-06_000720]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-23_004280]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-09_000670]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-06_002670]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-23_000620]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-06_002270]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-13_000540]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-03_000050]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-02_005360]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-03_000700]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-06_007660]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-02_001860]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-19_000480]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-04_001890]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-19_000130]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-13_000550]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-24_000510]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-18_001440]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-01_011080]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-12_003120]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-15_004850]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-00_006990]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-06_001850]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-02_003150]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-13_004500]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-06_001640]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-18_001470]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-19_000380]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-02_003750]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-22_003010]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-05_004440]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-18_001450]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-03_000140]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-04_001900]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-26_001500]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-15_004720]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-21_005750]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-23_001960]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-03_001790]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-08_005990]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-01_001800]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-sdr_f_000110]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-10_000570]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-01_011660]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-20_001110]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-19_000120]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-02_003700]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-02_001850]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-19_000290]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-04_001950]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-18_002840]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-06_001840]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-17_002300]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-19_000110]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-19_001520]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-03_004940]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-05_003570]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-22_003740]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-03_000780]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-02_005150]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-13_000610]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-12_003110]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-13_002040]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-15_004840]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-15_003900]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-10_004500]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-02_001820]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-19_000270]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-07_001300]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-21_001650]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-25_003640]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-16_004800]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-15_000530]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-13_002010]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-11_006290]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-04_002070]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-13_004610]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-09_000980]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-23_000190]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-04_003890]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-11_004850]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-23_000950]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-06_001650]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-11_005360]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-25_000790]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-00_002000]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-02_001910]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-21_003710]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-03_000770]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-01_001760]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-01_001850]]
 +
** Source: [[orthology-aragem]]
 +
== Pathways  ==
 +
* [[PWY-5381]], pyridine nucleotide cycling (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5381 PWY-5381]
 +
** '''5''' reactions found over '''11''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=a reduced plastocyanin}}
+
* RHEA:
−
{{#set: produced by=PLASTOQUINOL--PLASTOCYANIN-REDUCTASE-RXN|RXN-12647}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25568 25568]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03347 R03347]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-2.7.1.173}}
 +
{{#set: gene associated=Ec-20_001460|Ec-10_004370|Ec-01_003040|Ec-01_005280|Ec-20_004730|Ec-02_003160|Ec-13_004630|Ec-03_001800|Ec-13_004480|Ec-17_001910|Ec-13_004470|Ec-03_000730|Ec-23_000730|Ec-13_004620|Ec-03_000710|Ec-06_010590|Ec-21_005740|Ec-25_000800|Ec-16_003140|Ec-00_007610|Ec-25_002150|Ec-27_003090|Ec-13_004810|Ec-20_002410|Ec-25_000050|Ec-15_004730|Ec-01_002500|Ec-03_005360|Ec-18_001430|Ec-20_003730|Ec-04_001940|Ec-18_002880|Ec-02_003690|Ec-10_000810|Ec-06_001940|Ec-04_004550|Ec-08_006680|Ec-13_004490|Ec-04_000460|Ec-03_000720|Ec-11_000030|Ec-14_002550|Ec-18_001580|Ec-19_003770|Ec-04_002300|Ec-18_001480|Ec-06_000720|Ec-23_004280|Ec-09_000670|Ec-06_002670|Ec-23_000620|Ec-06_002270|Ec-13_000540|Ec-03_000050|Ec-02_005360|Ec-03_000700|Ec-06_007660|Ec-02_001860|Ec-19_000480|Ec-04_001890|Ec-19_000130|Ec-13_000550|Ec-24_000510|Ec-18_001440|Ec-01_011080|Ec-12_003120|Ec-15_004850|Ec-00_006990|Ec-06_001850|Ec-02_003150|Ec-13_004500|Ec-06_001640|Ec-18_001470|Ec-19_000380|Ec-02_003750|Ec-22_003010|Ec-05_004440|Ec-18_001450|Ec-03_000140|Ec-04_001900|Ec-26_001500|Ec-15_004720|Ec-21_005750|Ec-23_001960|Ec-03_001790|Ec-08_005990|Ec-01_001800|Ec-sdr_f_000110|Ec-10_000570|Ec-01_011660|Ec-20_001110|Ec-19_000120|Ec-02_003700|Ec-02_001850|Ec-19_000290|Ec-04_001950|Ec-18_002840|Ec-06_001840|Ec-17_002300|Ec-19_000110|Ec-19_001520|Ec-03_004940|Ec-05_003570|Ec-22_003740|Ec-03_000780|Ec-02_005150|Ec-13_000610|Ec-12_003110|Ec-13_002040|Ec-15_004840|Ec-15_003900|Ec-10_004500|Ec-02_001820|Ec-19_000270|Ec-07_001300|Ec-21_001650|Ec-25_003640|Ec-16_004800|Ec-15_000530|Ec-13_002010|Ec-11_006290|Ec-04_002070|Ec-13_004610|Ec-09_000980|Ec-23_000190|Ec-04_003890|Ec-11_004850|Ec-23_000950|Ec-06_001650|Ec-11_005360|Ec-25_000790|Ec-00_002000|Ec-02_001910|Ec-21_003710|Ec-03_000770|Ec-01_001760|Ec-01_001850}}
 +
{{#set: in pathway=PWY-5381}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:22, 21 March 2018

Reaction RXN-8443

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 β-D-ribosylnicotinate[c] => 1 β-nicotinate D-ribonucleotide[c] + 1 ADP[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5381, pyridine nucleotide cycling (plants): PWY-5381
    • 5 reactions found over 11 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-8443&oldid=26459"