Difference between revisions of "Ec-12 008560"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNPISOM-RXN MANNPISOM-RXN] == * direction: ** REVERSIBLE * common name: ** RmlC-like cupin domain...")
 
(Created page with "Category:Gene == Gene Ec-12_008560 == * left end position: ** 7665786 * transcription direction: ** POSITIVE * right end position: ** 7667932 * centisome position: ** 91.9...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNPISOM-RXN MANNPISOM-RXN] ==
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== Gene Ec-12_008560 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 7665786
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* common name:
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* transcription direction:
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** RmlC-like cupin domain
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** POSITIVE
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** Mannose-6-phosphate isomerase
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* right end position:
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** RmlC-like jelly roll fold
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** 7667932
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/5.3.1.8 EC-5.3.1.8]
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** 91.95943   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0067_0008
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** Esi0067_0008
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DNA-DIRECTED-RNA-POLYMERASE-RXN]]
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** 1 [[CPD-15979]][c] '''<=>''' 1 [[FRUCTOSE-6P]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 D-mannopyranose 6-phosphate[c] '''<=>''' 1 &beta;-D-fructofuranose 6-phosphate[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-28_000080]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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* [[Ec-28_000050]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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* [[Ec-20_000830]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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* [[Ec-27_005440]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[MANNCAT-PWY]], D-mannose degradation: [http://metacyc.org/META/NEW-IMAGE?object=MANNCAT-PWY MANNCAT-PWY]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-882 PWY-882]
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** '''7''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-3881]], mannitol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3881 PWY-3881]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7456]], mannan degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7456 PWY-7456]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5659]], GDP-mannose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5659 PWY-5659]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6992]], 1,5-anhydrofructose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6992 PWY-6992]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-3861]], mannitol degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3861 PWY-3861]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7586]], &beta;-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7586 PWY-7586]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[aragem]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=7665786}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12356 12356]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=7667932}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00772 R00772]
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{{#set: centisome position=91.95943    }}
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* UNIPROT:
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{{#set: common name=Esi_0067_0008|Esi0067_0008}}
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** [http://www.uniprot.org/uniprot/P07874 P07874]
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{{#set: reaction associated=DNA-DIRECTED-RNA-POLYMERASE-RXN}}
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** [http://www.uniprot.org/uniprot/P29951 P29951]
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** [http://www.uniprot.org/uniprot/P39841 P39841]
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** [http://www.uniprot.org/uniprot/P00946 P00946]
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** [http://www.uniprot.org/uniprot/P25081 P25081]
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** [http://www.uniprot.org/uniprot/Q52206 Q52206]
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** [http://www.uniprot.org/uniprot/P34949 P34949]
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** [http://www.uniprot.org/uniprot/P29952 P29952]
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** [http://www.uniprot.org/uniprot/P34948 P34948]
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** [http://www.uniprot.org/uniprot/Q55183 Q55183]
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** [http://www.uniprot.org/uniprot/P73377 P73377]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=RmlC-like cupin domain}}
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{{#set: common name=Mannose-6-phosphate isomerase}}
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{{#set: common name=RmlC-like jelly roll fold}}
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{{#set: ec number=EC-5.3.1.8}}
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{{#set: gene associated=Ec-28_000080|Ec-28_000050|Ec-20_000830|Ec-27_005440}}
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{{#set: in pathway=MANNCAT-PWY|PWY-882|PWY-3881|PWY-7456|PWY-5659|PWY-6992|PWY-3861|PWY-7586}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aragem}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:22, 21 March 2018

Gene Ec-12_008560

  • left end position:
    • 7665786
  • transcription direction:
    • POSITIVE
  • right end position:
    • 7667932
  • centisome position:
    • 91.95943
  • Synonym(s):
    • Esi_0067_0008
    • Esi0067_0008

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-12_008560&oldid=26467"