Difference between revisions of "RXN-11356"

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(Created page with "Category:Gene == Gene Ec-05_002520 == * left end position: ** 4183756 * transcription direction: ** POSITIVE * right end position: ** 4216079 * centisome position: ** 45.9...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11356 RXN-11356] == * direction: ** LEFT-TO-RIGHT * common name: ** zeta-carotene desaturase, c...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Ec-05_002520 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11356 RXN-11356] ==
* left end position:
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* direction:
** 4183756
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** LEFT-TO-RIGHT
* transcription direction:
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* common name:
** POSITIVE
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** zeta-carotene desaturase, chloroplast precursor
* right end position:
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** 4216079
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* centisome position:
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** 45.957645   
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* Synonym(s):
 
* Synonym(s):
** Esi_0004_0152
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** ζ-carotene desaturase
** Esi0004_0152
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** ZDS
** ICS, mxcD
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== Reactions associated ==
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== Reaction Formula ==
* [[ISOCHORSYN-RXN]]
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* With identifiers:
** esiliculosus_genome
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** 1 [[CPD-7526]][c] '''+''' 1 [[ETR-Quinones]][c] '''=>''' 1 [[ETR-Quinols]][c] '''+''' 1 [[CPD-7524]][c]
***ec-number
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* With common name(s):
* [[PEROXID-RXN]]
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** 1 9,9'-di-cis-ζ-carotene[c] '''+''' 1 an electron-transfer quinone[c] '''=>''' 1 an electron-transfer quinol[c] '''+''' 1 7,9,9'-cis-neurosporene[c]
** esiliculosus_genome
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***go-term
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== Genes associated with this reaction  ==
* [[RXN-14240]]
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Genes have been associated with this reaction based on different elements listed below.
** esiliculosus_genome
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* Gene: [[Ec-02_004660]]
***go-term
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** Source: [[annotation-esiliculosus_genome]]
* [[RXN-15288]]
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*** Assignment: EC-NUMBER
** esiliculosus_genome
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== Pathways ==
***go-term
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* [[PWY-6475]], trans-lycopene biosynthesis II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6475 PWY-6475]
* [[RXN-17352]]
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** '''4''' reactions found over '''8''' reactions in the full pathway
** esiliculosus_genome
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== Reconstruction information  ==
***go-term
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* Category: [[annotation]]
* [[RXN-8635]]
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** Source: [[annotation-esiliculosus_genome]]
** esiliculosus_genome
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*** Tool: [[pathwaytools]]
***go-term
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== Pathways associated ==
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* [[PWY-5901]]
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* [[PWY-6406]]
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* [[PWY-6824]]
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* [[PWY-5837]]
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* [[PWY-7445]]
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* [[PWY-5469]]
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* [[PWY-5466]]
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* [[PWY-5461]]
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* [[PWY-7214]]
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== External links  ==
 
== External links  ==
{{#set: left end position=4183756}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=POSITIVE}}
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{{#set: common name=zeta-carotene desaturase, chloroplast precursor}}
{{#set: right end position=4216079}}
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{{#set: common name=ζ-carotene desaturase|ZDS}}
{{#set: centisome position=45.957645    }}
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{{#set: gene associated=Ec-02_004660}}
{{#set: common name=Esi_0004_0152|Esi0004_0152|ICS, mxcD}}
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{{#set: in pathway=PWY-6475}}
{{#set: reaction associated=ISOCHORSYN-RXN|PEROXID-RXN|RXN-14240|RXN-15288|RXN-17352|RXN-8635}}
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{{#set: reconstruction category=annotation}}
{{#set: pathway associated=PWY-5901|PWY-6406|PWY-6824|PWY-5837|PWY-7445|PWY-5469|PWY-5466|PWY-5461|PWY-7214}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:23, 21 March 2018

Reaction RXN-11356

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • zeta-carotene desaturase, chloroplast precursor
  • Synonym(s):
    • ζ-carotene desaturase
    • ZDS

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 9,9'-di-cis-ζ-carotene[c] + 1 an electron-transfer quinone[c] => 1 an electron-transfer quinol[c] + 1 7,9,9'-cis-neurosporene[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6475, trans-lycopene biosynthesis II (plants): PWY-6475
    • 4 reactions found over 8 reactions in the full pathway

Reconstruction information

External links