Difference between revisions of "1.14.11.2-RXN"

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(Created page with "Category:Gene == Gene Ec-10_005990 == * left end position: ** 6009828 * transcription direction: ** POSITIVE * right end position: ** 6020152 * centisome position: ** 92.4...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.11.2-RXN 1.14.11.2-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Arginine/Asparagine...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
+
[[Category:Reaction]]
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== Gene Ec-10_005990 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.11.2-RXN 1.14.11.2-RXN] ==
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* left end position:
+
* direction:
−
** 6009828
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
−
** POSITIVE
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** Arginine/Asparagine/Proline hydroxylase
−
* right end position:
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** Prolyl 4-hydroxylase, alpha subunit
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** 6020152
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* ec number:
−
* centisome position:
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** [http://enzyme.expasy.org/EC/1.14.11.2 EC-1.14.11.2]
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** 92.444885   
+
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0006_0151
 
−
** Esi0006_0151
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROCOLLAGEN-L-PROLINE]][c] '''=>''' 1 [[CPD-6321]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c]
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***go-term
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* With common name(s):
−
== Pathways associated ==
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** 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''+''' 1 a [procollagen]-L-proline[c] '''=>''' 1 a [procollagen] trans 4-hyroxy-L-proline[c] '''+''' 1 CO2[c] '''+''' 1 succinate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-23_001510]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-12_005020]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-07_006010]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-08_002170]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-01_007120]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-12_001090]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-08_000690]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-24_001040]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-11_002580]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-06_002940]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-06_004630]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-26_000290]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
== Pathways ==
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=6009828}}
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* LIGAND-RXN:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03219 R03219]
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{{#set: right end position=6020152}}
+
* UNIPROT:
−
{{#set: centisome position=92.444885    }}
+
** [http://www.uniprot.org/uniprot/P21195 P21195]
−
{{#set: common name=Esi_0006_0151|Esi0006_0151}}
+
** [http://www.uniprot.org/uniprot/Q10576 Q10576]
−
{{#set: reaction associated=DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN}}
+
** [http://www.uniprot.org/uniprot/P16924 P16924]
 +
** [http://www.uniprot.org/uniprot/P13674 P13674]
 +
** [http://www.uniprot.org/uniprot/P05307 P05307]
 +
** [http://www.uniprot.org/uniprot/P09102 P09102]
 +
** [http://www.uniprot.org/uniprot/P07237 P07237]
 +
** [http://www.uniprot.org/uniprot/Q922C8 Q922C8]
 +
** [http://www.uniprot.org/uniprot/P04785 P04785]
 +
** [http://www.uniprot.org/uniprot/P54001 P54001]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Arginine/Asparagine/Proline hydroxylase}}
 +
{{#set: common name=Prolyl 4-hydroxylase, alpha subunit}}
 +
{{#set: ec number=EC-1.14.11.2}}
 +
{{#set: gene associated=Ec-23_001510|Ec-12_005020|Ec-07_006010|Ec-08_002170|Ec-01_007120|Ec-12_001090|Ec-08_000690|Ec-24_001040|Ec-11_002580|Ec-06_002940|Ec-06_004630|Ec-26_000290}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:23, 21 March 2018

Reaction 1.14.11.2-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Arginine/Asparagine/Proline hydroxylase
    • Prolyl 4-hydroxylase, alpha subunit
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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