Difference between revisions of "CENTFERM-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14117 RXN-14117] == * direction: ** REVERSIBLE * common name: ** Pyruvate kinase, alpha/beta **...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=CENTFERM-PWY CENTFERM-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-122...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14117 RXN-14117] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=CENTFERM-PWY CENTFERM-PWY] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
 
* common name:
 
* common name:
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** Pyruvate kinase, alpha/beta
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** pyruvate fermentation to butanoate
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** pyruvate kinase
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** Pyruvate kinase, barrel
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.1.40 EC-2.7.1.40]
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* Synonym(s):
 
* Synonym(s):
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** central fermentation pathway
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** acetobutylicum fermentation
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** pyruvate fermentation to butyrate
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''7''' reactions in the full pathway
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** 1 [[GTP]][c] '''+''' 1 [[PYRUVATE]][c] '''<=>''' 1 [[GDP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c]
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* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 GTP[c] '''+''' 1 pyruvate[c] '''<=>''' 1 GDP[c] '''+''' 1 H+[c] '''+''' 1 phosphoenolpyruvate[c]
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*** [[Ec-26_003940]]
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*** [[Ec-24_000870]]
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== Genes associated with this reaction  ==
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*** [[Ec-22_002850]]
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Genes have been associated with this reaction based on different elements listed below.
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** 2 reconstruction source(s) associated:
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* [[Ec-12_000950]]
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*** [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** [[orthology-aragem]]
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***EC-NUMBER
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* [[PYRUFLAVREDUCT-RXN]]
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* [[Ec-06_006860]]
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** 3 associated gene(s):
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** ESILICULOSUS_GENOME
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*** [[Ec-18_003420]]
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***EC-NUMBER
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*** [[Ec-15_004230]]
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* [[Ec-26_004170]]
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*** [[Ec-23_002710]]
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** ESILICULOSUS_GENOME
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** 1 reconstruction source(s) associated:
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***GO-TERM
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*** [[annotation-esiliculosus_genome]]
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== Pathways  ==
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* [[RXN-11662]]
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== Reconstruction information  ==
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** 2 associated gene(s):
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* [[annotation]]:
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*** [[Ec-19_005290]]
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** [[pathwaytools]]:
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*** [[Ec-14_006530]]
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*** [[esiliculosus_genome]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[RXN-11667]]
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** 2 associated gene(s):
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*** [[Ec-17_000320]]
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*** [[Ec-14_006530]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=BUTYRATE-KINASE-RXN BUTYRATE-KINASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=BUTYRYL-COA-DEHYDROGENASE-RXN BUTYRYL-COA-DEHYDROGENASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHATE-BUTYRYLTRANSFERASE-RXN PHOSPHATE-BUTYRYLTRANSFERASE-RXN]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-1224}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30298 30298]
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{{#set: taxonomic range=TAX-1239}}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=pyruvate fermentation to butanoate}}
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{{#set: common name=Pyruvate kinase, alpha/beta}}
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{{#set: common name=central fermentation pathway|acetobutylicum fermentation|pyruvate fermentation to butyrate}}
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{{#set: common name=pyruvate kinase}}
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{{#set: reaction found=4}}
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{{#set: common name=Pyruvate kinase, barrel}}
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{{#set: total reaction=7}}
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{{#set: ec number=EC-2.7.1.40}}
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{{#set: completion rate=57.0}}
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{{#set: gene associated=Ec-12_000950|Ec-06_006860|Ec-26_004170}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:23, 21 March 2018

Pathway CENTFERM-PWY

  • taxonomic range:
  • common name:
    • pyruvate fermentation to butanoate
  • Synonym(s):
    • central fermentation pathway
    • acetobutylicum fermentation
    • pyruvate fermentation to butyrate

Reaction(s) found

4 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CENTFERM-PWY&oldid=26515"