Difference between revisions of "RXN-14386"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARTATEKIN-RXN ASPARTATEKIN-RXN] == * direction: ** REVERSIBLE * common name: ** aspartate/glutam...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14386 RXN-14386] == * direction: ** LEFT-TO-RIGHT * common name: ** Aminotransferase class V do...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARTATEKIN-RXN ASPARTATEKIN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14386 RXN-14386] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** aspartate/glutamate/uridylate kinase
+
** Aminotransferase class V domain
−
** aspartate kinase/homoserine dehydrogenase
+
** Cysteine desulfurase
−
** Aspartate/glutamate/uridylate kinase
+
−
** aspartate kinase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.2.4 EC-2.7.2.4]
+
** [http://enzyme.expasy.org/EC/2.8.1.7 EC-2.8.1.7]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[L-ASPARTATE]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[L-BETA-ASPARTYL-P]][c] '''+''' 1 [[ADP]][c]
+
** 1 [[S-CD-S-SP-Complex]][c] '''=>''' 1 [[CD-2S-SP-Complex]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-aspartate[c] '''+''' 1 ATP[c] '''<=>''' 1 L-aspartyl-4-phosphate[c] '''+''' 1 ADP[c]
+
** 1 an S-sulfanyl-[cysteine desulfurase]-S-sulfanyl-[disordered-form scaffold protein] complex[c] '''=>''' 1 a [cysteine desulfurase]-(S-sulfanyl)2-[disordered-form scaffold protein] complex[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-13_002530]]
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* Gene: [[Ec-22_000950]]
−
** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Ec-27_003730]]
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* Gene: [[Ec-21_005640]]
−
** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
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*** Assignment: EC-NUMBER
−
* [[Ec-11_000830]]
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* Gene: [[Ec-21_003740]]
−
** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-24_000610]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[HOMOSERSYN-PWY]], L-homoserine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERSYN-PWY HOMOSERSYN-PWY]
+
* [[PWY-7250]], [2Fe-2S] iron-sulfur cluster biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7250 PWY-7250]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''10''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-7153]], grixazone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7153 PWY-7153]
+
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
−
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DAPLYSINESYN-PWY DAPLYSINESYN-PWY]
+
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-2942]], L-lysine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942]
+
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-2941]], L-lysine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941]
+
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-6559]], spermidine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6559 PWY-6559]
+
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097]
+
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-6562]], norspermidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6562 PWY-6562]
+
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
−
* [[P101-PWY]], ectoine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=P101-PWY P101-PWY]
+
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[aragem]]
+
*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23776 23776]
+
{{#set: common name=Aminotransferase class V domain}}
−
* LIGAND-RXN:
+
{{#set: common name=Cysteine desulfurase}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00480 R00480]
+
{{#set: ec number=EC-2.8.1.7}}
−
* UNIPROT:
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{{#set: gene associated=Ec-22_000950|Ec-21_005640|Ec-21_003740}}
−
** [http://www.uniprot.org/uniprot/P08495 P08495]
+
{{#set: in pathway=PWY-7250}}
−
** [http://www.uniprot.org/uniprot/P44505 P44505]
+
−
** [http://www.uniprot.org/uniprot/P27725 P27725]
+
−
** [http://www.uniprot.org/uniprot/Q04795 Q04795]
+
−
** [http://www.uniprot.org/uniprot/Q57991 Q57991]
+
−
** [http://www.uniprot.org/uniprot/P00561 P00561]
+
−
** [http://www.uniprot.org/uniprot/P00562 P00562]
+
−
** [http://www.uniprot.org/uniprot/Q9PHT4 Q9PHT4]
+
−
** [http://www.uniprot.org/uniprot/Q9JTN3 Q9JTN3]
+
−
** [http://www.uniprot.org/uniprot/P53553 P53553]
+
−
** [http://www.uniprot.org/uniprot/P10869 P10869]
+
−
** [http://www.uniprot.org/uniprot/P08660 P08660]
+
−
** [http://www.uniprot.org/uniprot/P26512 P26512]
+
−
** [http://www.uniprot.org/uniprot/P37142 P37142]
+
−
** [http://www.uniprot.org/uniprot/P41403 P41403]
+
−
** [http://www.uniprot.org/uniprot/P0A4Z9 P0A4Z9]
+
−
** [http://www.uniprot.org/uniprot/Q9SA18 Q9SA18]
+
−
** [http://www.uniprot.org/uniprot/P49079 P49079]
+
−
** [http://www.uniprot.org/uniprot/P49080 P49080]
+
−
** [http://www.uniprot.org/uniprot/P93402 P93402]
+
−
** [http://www.uniprot.org/uniprot/O81852 O81852]
+
−
** [http://www.uniprot.org/uniprot/O63067 O63067]
+
−
** [http://www.uniprot.org/uniprot/O65027 O65027]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=aspartate/glutamate/uridylate kinase}}
+
−
{{#set: common name=aspartate kinase/homoserine dehydrogenase}}
+
−
{{#set: common name=Aspartate/glutamate/uridylate kinase}}
+
−
{{#set: common name=aspartate kinase}}
+
−
{{#set: ec number=EC-2.7.2.4}}
+
−
{{#set: gene associated=Ec-13_002530|Ec-27_003730|Ec-11_000830|Ec-24_000610}}
+
−
{{#set: in pathway=HOMOSERSYN-PWY|PWY-7153|DAPLYSINESYN-PWY|PWY-2942|PWY-2941|PWY-6559|PWY-5097|PWY-6562|P101-PWY}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=aragem}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 19:24, 21 March 2018

Reaction RXN-14386

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Aminotransferase class V domain
    • Cysteine desulfurase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 an S-sulfanyl-[cysteine desulfurase]-S-sulfanyl-[disordered-form scaffold protein] complex[c] => 1 a [cysteine desulfurase]-(S-sulfanyl)2-[disordered-form scaffold protein] complex[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7250, [2Fe-2S] iron-sulfur cluster biosynthesis: PWY-7250
    • 10 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-14386&oldid=26702"