Difference between revisions of "RXN-14116"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=FUM FUM] == * smiles: ** C(C([O-])=O)=CC(=O)[O-] * inchi key: ** InChIKey=VZCYOOQTPOCHFL-OWOJBT...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14116 RXN-14116] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=FUM FUM] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14116 RXN-14116] ==
* smiles:
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* direction:
** C(C([O-])=O)=CC(=O)[O-]
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** LEFT-TO-RIGHT
* inchi key:
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* ec number:
** InChIKey=VZCYOOQTPOCHFL-OWOJBTEDSA-L
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** [http://enzyme.expasy.org/EC/1.2.1.88 EC-1.2.1.88]
* common name:
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** fumarate
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* molecular weight:
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** 114.057   
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* Synonym(s):
 
* Synonym(s):
** fum
 
** fumaric acid
 
  
== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
* [[RXN0-5245]]
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* With identifiers:
== Reaction(s) known to produce the compound ==
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** 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[GLT]][c] '''+''' 2 [[PROTON]][c]
* [[RXN-15378]]
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* With common name(s):
* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN]]
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** 1 L-glutamate-5-semialdehyde[c] '''+''' 1 NAD+[c] '''+''' 1 H2O[c] '''=>''' 1 NADH[c] '''+''' 1 L-glutamate[c] '''+''' 2 H+[c]
* [[RXN-14971]]
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* [[RXN-22]]
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== Genes associated with this reaction  ==
== Reaction(s) of unknown directionality ==
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== Pathways  ==
* [[ARGSUCCINLYA-RXN]]
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* [[PROUT-PWY]], L-proline degradation: [http://metacyc.org/META/NEW-IMAGE?object=PROUT-PWY PROUT-PWY]
* [[FUMARATE-REDUCTASE-NADH-RXN]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
* [[FUMHYDR-RXN]]
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* [[ARGASEDEG-PWY]], L-arginine degradation I (arginase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGASEDEG-PWY ARGASEDEG-PWY]
* [[AICARSYN-RXN]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
* [[AMPSYN-RXN]]
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* [[PWY-6853]], ethylene biosynthesis II (microbes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6853 PWY-6853]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* CAS : 110-17-8
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* RHEA:
* BIGG : 33938
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30236 30236]
* DRUGBANK : DB01677
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* LIGAND-RXN:
* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R00245 R00245]
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5460307 5460307]
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{{#set: direction=LEFT-TO-RIGHT}}
* KNAPSACK : C00001183
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{{#set: ec number=EC-1.2.1.88}}
* HMDB : HMDB00134
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{{#set: in pathway=PROUT-PWY|ARGASEDEG-PWY|PWY-6853}}
* LIGAND-CPD:
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{{#set: reconstruction category=annotation}}
** [http://www.genome.jp/dbget-bin/www_bget?C00122 C00122]
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
* CHEMSPIDER:
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{{#set: reconstruction tool=pathwaytools}}
** [http://www.chemspider.com/Chemical-Structure.4573886.html 4573886]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=29806 29806]
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* METABOLIGHTS : MTBLC29806
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{{#set: smiles=C(C([O-])=O)=CC(=O)[O-]}}
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{{#set: inchi key=InChIKey=VZCYOOQTPOCHFL-OWOJBTEDSA-L}}
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{{#set: common name=fumarate}}
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{{#set: molecular weight=114.057    }}
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{{#set: common name=fum|fumaric acid}}
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{{#set: consumed by=RXN0-5245}}
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{{#set: produced by=RXN-15378|SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN|RXN-14971|RXN-22}}
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{{#set: consumed or produced by=ARGSUCCINLYA-RXN|FUMARATE-REDUCTASE-NADH-RXN|FUMHYDR-RXN|AICARSYN-RXN|AMPSYN-RXN}}
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Latest revision as of 19:25, 21 March 2018

Reaction RXN-14116

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PROUT-PWY, L-proline degradation: PROUT-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • ARGASEDEG-PWY, L-arginine degradation I (arginase pathway): ARGASEDEG-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6853, ethylene biosynthesis II (microbes): PWY-6853
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links