Difference between revisions of "GERANYLGERANYL-PP"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17115 RXN-17115] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GERANYLGERANYL-PP GERANYLGERANYL-PP] == * smiles: ** CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17115 RXN-17115] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GERANYLGERANYL-PP GERANYLGERANYL-PP] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-]
−
* ec number:
+
* inchi key:
−
** [http://enzyme.expasy.org/EC/1.1.1 EC-1.1.1]
+
** InChIKey=OINNEUNVOZHBOX-QIRCYJPOSA-K
 +
* common name:
 +
** geranylgeranyl diphosphate
 +
* molecular weight:
 +
** 447.424   
 
* Synonym(s):
 
* Synonym(s):
 +
** all-trans-geranyl-geranyl-pp
 +
** geranylgeranyl-PP
 +
** GGPP
 +
** geranylgeranyl diphosphate
 +
** (2E,6E,10E)-geranylgeranyl diphosphate
 +
** ω,E,E,E-geranylgeranyl diphosphate
 +
** (2E,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-yl diphosphate
 +
** all-trans-geranylgeranyl diphosphate
 +
** 2-trans,6-trans,10-trans-geranylgeranyl diphosphate
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[RXN-7658]]
−
** 1 [[NAD]][c] '''+''' 1 [[CPD-18493]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-18494]][c]
+
* [[2.5.1.32-RXN]]
−
* With common name(s):
+
* [[RXN-10625]]
−
** 1 NAD+[c] '''+''' 1 (3S)-hydroxy-(6Z,9Z,12Z,15Z,18Z)-tetracosapentaenoyl-CoA[c] '''=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 3-oxo-(6Z,9Z,12Z,15Z,18Z)-tetracosapentaenoyl-CoA[c]
+
* [[2.5.1.41-RXN]]
−
 
+
* [[RXN-11486]]
−
== Genes associated with this reaction  ==
+
== Reaction(s) known to produce the compound ==
−
== Pathways  ==
+
* [[FARNESYLTRANSTRANSFERASE-RXN]]
−
* [[PWY-7726]], (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7726 PWY-7726]
+
== Reaction(s) of unknown directionality ==
−
** '''13''' reactions found over '''13''' reactions in the full pathway
+
* [[RXN1F-144]]
−
== Reconstruction information  ==
+
* [[RXN-3701]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* DRUGBANK : DB07841
−
{{#set: ec number=EC-1.1.1}}
+
* PUBCHEM:
−
{{#set: in pathway=PWY-7726}}
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5497105 5497105]
−
{{#set: reconstruction category=annotation}}
+
* HMDB : HMDB04486
−
{{#set: reconstruction tool=pathwaytools}}
+
* LIGAND-CPD:
−
{{#set: reconstruction source=esiliculosus_genome}}
+
** [http://www.genome.jp/dbget-bin/www_bget?C00353 C00353]
 +
* CHEMSPIDER:
 +
** [http://www.chemspider.com/Chemical-Structure.4593687.html 4593687]
 +
* CHEBI:
 +
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58756 58756]
 +
* METABOLIGHTS : MTBLC58756
 +
{{#set: smiles=CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-]}}
 +
{{#set: inchi key=InChIKey=OINNEUNVOZHBOX-QIRCYJPOSA-K}}
 +
{{#set: common name=geranylgeranyl diphosphate}}
 +
{{#set: molecular weight=447.424    }}
 +
{{#set: common name=all-trans-geranyl-geranyl-pp|geranylgeranyl-PP|GGPP|geranylgeranyl diphosphate|(2E,6E,10E)-geranylgeranyl diphosphate|ω,E,E,E-geranylgeranyl diphosphate|(2E,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-yl diphosphate|all-trans-geranylgeranyl diphosphate|2-trans,6-trans,10-trans-geranylgeranyl diphosphate}}
 +
{{#set: consumed by=RXN-7658|2.5.1.32-RXN|RXN-10625|2.5.1.41-RXN|RXN-11486}}
 +
{{#set: produced by=FARNESYLTRANSTRANSFERASE-RXN}}
 +
{{#set: reversible reaction associated=RXN1F-144|RXN-3701}}

Latest revision as of 19:25, 21 March 2018

Metabolite GERANYLGERANYL-PP

  • smiles:
    • CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-]
  • inchi key:
    • InChIKey=OINNEUNVOZHBOX-QIRCYJPOSA-K
  • common name:
    • geranylgeranyl diphosphate
  • molecular weight:
    • 447.424
  • Synonym(s):
    • all-trans-geranyl-geranyl-pp
    • geranylgeranyl-PP
    • GGPP
    • geranylgeranyl diphosphate
    • (2E,6E,10E)-geranylgeranyl diphosphate
    • ω,E,E,E-geranylgeranyl diphosphate
    • (2E,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-yl diphosphate
    • all-trans-geranylgeranyl diphosphate
    • 2-trans,6-trans,10-trans-geranylgeranyl diphosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • DRUGBANK : DB07841
  • PUBCHEM:
  • HMDB : HMDB04486
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC58756
"CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=GERANYLGERANYL-PP&oldid=26838"