Difference between revisions of "DIHYDROXYMETVALDEHYDRAT-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15129 RXN-15129] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyridoxal phosphate-depende...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROXYMETVALDEHYDRAT-RXN DIHYDROXYMETVALDEHYDRAT-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15129 RXN-15129] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROXYMETVALDEHYDRAT-RXN DIHYDROXYMETVALDEHYDRAT-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Pyridoxal phosphate-dependent transferase, major region, subdomain 1
+
** 2,3-Dihydroxy-3-methylvalerate dehydratase
 +
** Dihydroxy-acid/6-phosphogluconate dehydratase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/4.2.1.9 EC-4.2.1.9]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CYS]][c] '''=>''' 1 [[2-AMINOACRYLATE]][c] '''+''' 1 [[HS]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[1-KETO-2-METHYLVALERATE]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[2-KETO-3-METHYL-VALERATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-cysteine[c] '''=>''' 1 2-aminoprop-2-enoate[c] '''+''' 1 hydrogen sulfide[c] '''+''' 1 H+[c]
+
** 1 (R)-2,3-dihydroxy-3-methylpentanoate[c] '''=>''' 1 H2O[c] '''+''' 1 (S)-3-methyl-2-oxopentanoate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-12_003100]]
+
* Gene: [[Ec-03_000220]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-aragem]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[LCYSDEG-PWY]], L-cysteine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=LCYSDEG-PWY LCYSDEG-PWY]
+
* [[PWY-5103]], L-isoleucine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5103 PWY-5103]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY]
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5101]], L-isoleucine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101]
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5104]], L-isoleucine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5104 PWY-5104]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-aragem]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27694 27694]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R05070 R05070]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P55186 P55186]
 +
** [http://www.uniprot.org/uniprot/Q9JUE0 Q9JUE0]
 +
** [http://www.uniprot.org/uniprot/P05791 P05791]
 +
** [http://www.uniprot.org/uniprot/Q9UZ03 Q9UZ03]
 +
** [http://www.uniprot.org/uniprot/P44851 P44851]
 +
** [http://www.uniprot.org/uniprot/Q02139 Q02139]
 +
** [http://www.uniprot.org/uniprot/Q9PJ98 Q9PJ98]
 +
** [http://www.uniprot.org/uniprot/P39522 P39522]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Pyridoxal phosphate-dependent transferase, major region, subdomain 1}}
+
{{#set: common name=2,3-Dihydroxy-3-methylvalerate dehydratase}}
−
{{#set: gene associated=Ec-12_003100}}
+
{{#set: common name=Dihydroxy-acid/6-phosphogluconate dehydratase}}
−
{{#set: in pathway=LCYSDEG-PWY}}
+
{{#set: ec number=EC-4.2.1.9}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: gene associated=Ec-03_000220}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: in pathway=PWY-5103|ILEUSYN-PWY|PWY-5101|PWY-5104}}
−
{{#set: reconstruction source=esiliculosus_genome}}
+
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:26, 21 March 2018

Reaction DIHYDROXYMETVALDEHYDRAT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 2,3-Dihydroxy-3-methylvalerate dehydratase
    • Dihydroxy-acid/6-phosphogluconate dehydratase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5103, L-isoleucine biosynthesis III: PWY-5103
    • 4 reactions found over 7 reactions in the full pathway
  • ILEUSYN-PWY, L-isoleucine biosynthesis I (from threonine): ILEUSYN-PWY
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-5101, L-isoleucine biosynthesis II: PWY-5101
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-5104, L-isoleucine biosynthesis IV: PWY-5104
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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