Difference between revisions of "PWY-6163"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5063 RXN0-5063] == * direction: ** LEFT-TO-RIGHT * common name: ** tRNA-i(6)A37 thiotransferas...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5063 RXN0-5063] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3041 TAX-3041]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2763 TAX-2763]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-287987 TAX-287987]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-5204 TAX-5204]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2836 TAX-2836]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4762 TAX-4762]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4890 TAX-4890]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-5794 TAX-5794]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** tRNA-i(6)A37 thiotransferase enzyme MiaB
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** chorismate biosynthesis from 3-dehydroquinate
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* ec number:
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** [http://enzyme.expasy.org/EC/2.8.4.3 EC-2.8.4.3]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''6''' reactions found over '''6''' reactions in the full pathway
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** 1 [[Sulfurated-Sulfur-Acceptors]][c] '''+''' 1 [[6-Dimethylallyladenosine37-tRNAs]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[Donor-H2]][c] '''=>''' 1 [[CPD-11592]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CH33ADO]][c] '''+''' 1 [[MET]][c] '''+''' 1 [[Acceptor]][c] '''+''' 1 [[Unsulfurated-Sulfur-Acceptors]][c] '''+''' 2 [[PROTON]][c]
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* [[2.5.1.19-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 a sulfurated [sulfur carrier][c] '''+''' 1 N6-dimethylallyladenosine37 in tRNA[c] '''+''' 2 S-adenosyl-L-methionine[c] '''+''' 1 an reduced unknown electron acceptor[c] '''=>''' 1 2-methylthio-N6-dimethylallyladenosine37 in tRNA[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 5'-deoxyadenosine[c] '''+''' 1 L-methionine[c] '''+''' 1 an oxidized unknown electron acceptor[c] '''+''' 1 an unsulfurated [sulfur carrier][c] '''+''' 2 H+[c]
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*** [[Ec-26_000800]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-aragem]]
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* [[Ec-02_004930]]
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* [[3-DEHYDROQUINATE-DEHYDRATASE-RXN]]
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** ESILICULOSUS_GENOME
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** 4 associated gene(s):
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***AUTOMATED-NAME-MATCH
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*** [[Ec-07_000550]]
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== Pathways  ==
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*** [[Ec-26_004120]]
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== Reconstruction information  ==
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*** [[Ec-14_005400]]
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* [[annotation]]:
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*** [[Ec-02_006010]]
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** [[pathwaytools]]:
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** 2 reconstruction source(s) associated:
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*** [[esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[CHORISMATE-SYNTHASE-RXN]]
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** 1 associated gene(s):
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*** [[Ec-11_005820]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[RXN-7968]]
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** 1 associated gene(s):
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*** [[Ec-02_006010]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[SHIKIMATE-5-DEHYDROGENASE-RXN]]
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** 1 associated gene(s):
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*** [[Ec-02_006010]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[SHIKIMATE-KINASE-RXN]]
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** 2 associated gene(s):
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*** [[Ec-02_005600]]
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*** [[Ec-11_000770]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* ECOCYC:
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{{#set: common name=tRNA-i(6)A37 thiotransferase enzyme MiaB}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6163 PWY-6163]
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{{#set: ec number=EC-2.8.4.3}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: gene associated=Ec-02_004930}}
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{{#set: taxonomic range=TAX-3041}}
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{{#set: in pathway=}}
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{{#set: taxonomic range=TAX-2763}}
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{{#set: reconstruction category=annotation}}
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{{#set: taxonomic range=TAX-287987}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: taxonomic range=TAX-5204}}
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{{#set: reconstruction source=esiliculosus_genome}}
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{{#set: taxonomic range=TAX-2836}}
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{{#set: taxonomic range=TAX-4762}}
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{{#set: taxonomic range=TAX-4890}}
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{{#set: taxonomic range=TAX-5794}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=chorismate biosynthesis from 3-dehydroquinate}}
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{{#set: reaction found=6}}
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{{#set: total reaction=6}}
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{{#set: completion rate=100.0}}

Latest revision as of 19:27, 21 March 2018

Pathway PWY-6163

Reaction(s) found

6 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links








Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-6163&oldid=27072"