Difference between revisions of "Ec-27 004830"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15635 RXN-15635] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-methyl-2-oxobutanoate hyd...")
 
(Created page with "Category:Gene == Gene Ec-27_004830 == * left end position: ** 4283995 * transcription direction: ** POSITIVE * right end position: ** 4288887 * centisome position: ** 66.4...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15635 RXN-15635] ==
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== Gene Ec-27_004830 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4283995
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* common name:
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* transcription direction:
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** 3-methyl-2-oxobutanoate hydroxymethyltransferase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.1.2.11 EC-2.1.2.11]
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** 4288887
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* centisome position:
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** 66.41948   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0000_0309
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** Esi0000_0309
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.1.1.64-RXN]]
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** 1 [[METHYLENETETRAHYDROMETHANOPTERIN]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[2-KETO-ISOVALERATE]][c] '''=>''' 1 [[THMPT]][c] '''+''' 1 [[2-DEHYDROPANTOATE]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 5,10-methylene-tetrahydromethanopterin[c] '''+''' 1 H2O[c] '''+''' 1 3-methyl-2-oxobutanoate[c] '''=>''' 1 tetrahydromethanopterin[c] '''+''' 1 2-dehydropantoate[c]
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* Reaction: [[CARBOXYLESTERASE-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RETINYL-PALMITATE-ESTERASE-RXN]]
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* [[Ec-01_001700]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: automated-name-match
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***GO-TERM
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* Reaction: [[RXN-10711]]
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== Pathways  ==
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-6654]], phosphopantothenate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6654 PWY-6654]
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*** Assignment: automated-name-match
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* Reaction: [[RXN-10767]]
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== Reconstruction information  ==
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** Source: [[annotation-esiliculosus_genome]]
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* [[annotation]]:
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*** Assignment: automated-name-match
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** [[pathwaytools]]:
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* Reaction: [[RXN-12252]]
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*** [[esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-12575]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXNQT-4366]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-6857]]
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* [[PWY-6303]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=4283995}}
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{{#set: common name=3-methyl-2-oxobutanoate hydroxymethyltransferase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-2.1.2.11}}
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{{#set: right end position=4288887}}
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{{#set: gene associated=Ec-01_001700}}
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{{#set: centisome position=66.41948    }}
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{{#set: in pathway=PWY-6654}}
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{{#set: common name=Esi_0000_0309|Esi0000_0309}}
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{{#set: reconstruction category=annotation}}
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{{#set: reaction associated=3.1.1.64-RXN|CARBOXYLESTERASE-RXN|RETINYL-PALMITATE-ESTERASE-RXN|RXN-10711|RXN-10767|RXN-12252|RXN-12575|RXNQT-4366}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: pathway associated=PWY-6857|PWY-6303}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:28, 21 March 2018

Gene Ec-27_004830

  • left end position:
    • 4283995
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4288887
  • centisome position:
    • 66.41948
  • Synonym(s):
    • Esi_0000_0309
    • Esi0000_0309

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-27_004830&oldid=27174"