Difference between revisions of "PWY-5484"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12184 RXN-12184] == * direction: ** LEFT-TO-RIGHT * common name: ** long chain acyl-CoA synthet...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5484 PWY-5484] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12184 RXN-12184] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5484 PWY-5484] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 
* common name:
 
* common name:
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** long chain acyl-CoA synthetase
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** glycolysis II (from fructose 6-phosphate)
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** long chain acyl-coA synthetase
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* ec number:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''11''' reactions found over '''11''' reactions in the full pathway
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** 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CPD-17637]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[CPD-17638]][c]
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* [[2PGADEHYDRAT-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 coenzyme A[c] '''+''' 1 ATP[c] '''+''' 1 7-hydroxylaurate[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 7-hydroxylauroyl-CoA[c]
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*** [[Ec-14_005400]]
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*** [[Ec-27_004000]]
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== Genes associated with this reaction  ==
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*** [[Ec-26_004120]]
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Genes have been associated with this reaction based on different elements listed below.
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** 2 reconstruction source(s) associated:
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* [[Ec-12_008720]]
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*** [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** [[orthology-aragem]]
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***AUTOMATED-NAME-MATCH
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* [[3PGAREARR-RXN]]
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* [[Ec-01_001560]]
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** 7 associated gene(s):
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** ESILICULOSUS_GENOME
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*** [[Ec-27_000330]]
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***AUTOMATED-NAME-MATCH
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*** [[Ec-24_002670]]
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* [[Ec-03_003710]]
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*** [[Ec-10_005410]]
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** ESILICULOSUS_GENOME
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*** [[Ec-03_002160]]
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***AUTOMATED-NAME-MATCH
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*** [[Ec-03_002170]]
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* [[Ec-02_006430]]
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*** [[Ec-01_000980]]
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** ESILICULOSUS_GENOME
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*** [[Ec-06_009930]]
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***AUTOMATED-NAME-MATCH
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** 2 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-esiliculosus_genome]]
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* [[PWY-6733]], sporopollenin precursors biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733]
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*** [[orthology-aragem]]
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** '''4''' reactions found over '''18''' reactions in the full pathway
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* [[6PFRUCTPHOS-RXN]]
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== Reconstruction information  ==
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** 3 associated gene(s):
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* [[annotation]]:
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*** [[Ec-14_003880]]
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** [[pathwaytools]]:
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*** [[Ec-22_000070]]
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*** [[esiliculosus_genome]]
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*** [[Ec-12_002540]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[F16ALDOLASE-RXN]]
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** 4 associated gene(s):
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*** [[Ec-10_004980]]
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*** [[Ec-01_008040]]
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*** [[Ec-10_000880]]
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*** [[Ec-14_001680]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[F16BDEPHOS-RXN]]
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** 7 associated gene(s):
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*** [[Ec-06_004200]]
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*** [[Ec-04_004710]]
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*** [[Ec-17_003090]]
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*** [[Ec-12_004070]]
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*** [[Ec-14_005760]]
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*** [[Ec-22_000360]]
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*** [[Ec-21_001790]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[GAPOXNPHOSPHN-RXN]]
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** 4 associated gene(s):
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*** [[Ec-25_003550]]
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*** [[Ec-19_001850]]
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*** [[Ec-19_003020]]
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*** [[Ec-08_000500]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[PEPDEPHOS-RXN]]
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** 3 associated gene(s):
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*** [[Ec-26_004170]]
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*** [[Ec-06_006860]]
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*** [[Ec-12_000950]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[PEPSYNTH-RXN]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[PHOSGLYPHOS-RXN]]
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** 6 associated gene(s):
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*** [[Ec-12_004530]]
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*** [[Ec-21_005710]]
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*** [[Ec-21_004220]]
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*** [[Ec-08_002400]]
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*** [[Ec-12_004550]]
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*** [[Ec-01_001350]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[RXN-15513]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[TRIOSEPISOMERIZATION-RXN]]
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** 4 associated gene(s):
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*** [[Ec-08_000500]]
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*** [[Ec-24_000360]]
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*** [[Ec-03_002790]]
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*** [[Ec-23_004160]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* ECOCYC:
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{{#set: common name=long chain acyl-CoA synthetase}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-5484 PWY-5484]
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{{#set: common name=long chain acyl-coA synthetase}}
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{{#set: taxonomic range=TAX-2759}}
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{{#set: ec number=EC-6.2.1.3}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: gene associated=Ec-12_008720|Ec-01_001560|Ec-03_003710|Ec-02_006430}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: in pathway=PWY-6733}}
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{{#set: common name=glycolysis II (from fructose 6-phosphate)}}
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{{#set: reconstruction category=annotation}}
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{{#set: reaction found=11}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: total reaction=11}}
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{{#set: reconstruction source=esiliculosus_genome}}
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{{#set: completion rate=100.0}}

Latest revision as of 20:29, 21 March 2018

Pathway PWY-5484

  • taxonomic range:
  • common name:
    • glycolysis II (from fructose 6-phosphate)
  • Synonym(s):

Reaction(s) found

11 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-5484&oldid=27209"