Difference between revisions of "PREPHENATEDEHYDRAT-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNCARBAMTRANSFER-RXN ORNCARBAMTRANSFER-RXN] == * direction: ** REVERSIBLE * common name: ** Aspart...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PREPHENATEDEHYDRAT-RXN PREPHENATEDEHYDRAT-RXN] == * direction: ** REVERSIBLE * common name: ** prep...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNCARBAMTRANSFER-RXN ORNCARBAMTRANSFER-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PREPHENATEDEHYDRAT-RXN PREPHENATEDEHYDRAT-RXN] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** Aspartate/ornithine carbamoyltransferase
+
** prephenate dehydratase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.1.3.3 EC-2.1.3.3]
+
** [http://enzyme.expasy.org/EC/4.2.1.51 EC-4.2.1.51]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CARBAMOYL-P]][c] '''+''' 1 [[L-ORNITHINE]][c] '''<=>''' 1 [[L-CITRULLINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[PREPHENATE]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[PHENYL-PYRUVATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 carbamoyl phosphate[c] '''+''' 1 L-ornithine[c] '''<=>''' 1 L-citrulline[c] '''+''' 1 H+[c] '''+''' 1 phosphate[c]
+
** 1 H+[c] '''+''' 1 prephenate[c] '''<=>''' 1 CO2[c] '''+''' 1 H2O[c] '''+''' 1 2-oxo-3-phenylpropanoate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-00_004630]]
+
* Gene: [[Ec-27_003130]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: GO-TERM
−
** [[pantograph]]-[[aragem]]
+
−
** [[pantograph]]-[[aragem]]
+
−
** [[pantograph]]-[[aragem]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYN-PWY ARGSYN-PWY]
+
* [[PWY-7432]], L-phenylalanine biosynthesis III (cytosolic, plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7432 PWY-7432]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-4984]], urea cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984]
+
* [[PHESYN]], L-phenylalanine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PHESYN PHESYN]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYNBSUB-PWY ARGSYNBSUB-PWY]
+
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-4981]], L-proline biosynthesis II (from arginine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4981 PWY-4981]
+
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-7400]], L-arginine biosynthesis IV (archaebacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7400 PWY-7400]
+
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
−
* [[CITRULLINE-DEG-PWY]], L-citrulline degradation: [http://metacyc.org/META/NEW-IMAGE?object=CITRULLINE-DEG-PWY CITRULLINE-DEG-PWY]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
+
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[aragem]]
+
*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19513 19513]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21648 21648]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01398 R01398]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01373 R01373]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q58291 Q58291]
+
** [http://www.uniprot.org/uniprot/P27603 P27603]
−
** [http://www.uniprot.org/uniprot/Q9CHD1 Q9CHD1]
+
** [http://www.uniprot.org/uniprot/P43900 P43900]
−
** [http://www.uniprot.org/uniprot/Q7M182 Q7M182]
+
** [http://www.uniprot.org/uniprot/P21203 P21203]
−
** [http://www.uniprot.org/uniprot/Q9JTI4 Q9JTI4]
+
** [http://www.uniprot.org/uniprot/Q58054 Q58054]
−
** [http://www.uniprot.org/uniprot/P11727 P11727]
+
** [http://www.uniprot.org/uniprot/Q9CEU2 Q9CEU2]
−
** [http://www.uniprot.org/uniprot/Q9CEY4 Q9CEY4]
+
** [http://www.uniprot.org/uniprot/Q9PII3 Q9PII3]
−
** [http://www.uniprot.org/uniprot/Q9CE14 Q9CE14]
+
** [http://www.uniprot.org/uniprot/P0A9J8 P0A9J8]
−
** [http://www.uniprot.org/uniprot/Q9PNU6 Q9PNU6]
+
** [http://www.uniprot.org/uniprot/Q02286 Q02286]
−
** [http://www.uniprot.org/uniprot/P44770 P44770]
+
** [http://www.uniprot.org/uniprot/P43909 P43909]
−
** [http://www.uniprot.org/uniprot/Q9YHY9 Q9YHY9]
+
** [http://www.uniprot.org/uniprot/P32452 P32452]
−
** [http://www.uniprot.org/uniprot/P11066 P11066]
+
−
** [http://www.uniprot.org/uniprot/P11803 P11803]
+
−
** [http://www.uniprot.org/uniprot/P18186 P18186]
+
−
** [http://www.uniprot.org/uniprot/P05150 P05150]
+
−
** [http://www.uniprot.org/uniprot/P14995 P14995]
+
−
** [http://www.uniprot.org/uniprot/P06960 P06960]
+
−
** [http://www.uniprot.org/uniprot/P04391 P04391]
+
−
** [http://www.uniprot.org/uniprot/P00480 P00480]
+
−
** [http://www.uniprot.org/uniprot/P11725 P11725]
+
−
** [http://www.uniprot.org/uniprot/P21302 P21302]
+
−
** [http://www.uniprot.org/uniprot/P11724 P11724]
+
−
** [http://www.uniprot.org/uniprot/P08308 P08308]
+
−
** [http://www.uniprot.org/uniprot/P68747 P68747]
+
−
** [http://www.uniprot.org/uniprot/P00481 P00481]
+
−
** [http://www.uniprot.org/uniprot/P31317 P31317]
+
−
** [http://www.uniprot.org/uniprot/Q01322 Q01322]
+
−
** [http://www.uniprot.org/uniprot/Q01323 Q01323]
+
−
** [http://www.uniprot.org/uniprot/Q01324 Q01324]
+
−
** [http://www.uniprot.org/uniprot/Q01326 Q01326]
+
−
** [http://www.uniprot.org/uniprot/Q01325 Q01325]
+
−
** [http://www.uniprot.org/uniprot/Q9JYI3 Q9JYI3]
+
−
** [http://www.uniprot.org/uniprot/Q01327 Q01327]
+
−
** [http://www.uniprot.org/uniprot/P0A5M9 P0A5M9]
+
−
** [http://www.uniprot.org/uniprot/Q02047 Q02047]
+
−
** [http://www.uniprot.org/uniprot/Q9TRC9 Q9TRC9]
+
−
** [http://www.uniprot.org/uniprot/Q48296 Q48296]
+
−
** [http://www.uniprot.org/uniprot/P75473 P75473]
+
−
** [http://www.uniprot.org/uniprot/Q49080 Q49080]
+
−
** [http://www.uniprot.org/uniprot/Q43814 Q43814]
+
−
** [http://www.uniprot.org/uniprot/O53089 O53089]
+
−
** [http://www.uniprot.org/uniprot/O50039 O50039]
+
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=Aspartate/ornithine carbamoyltransferase}}
+
{{#set: common name=prephenate dehydratase}}
−
{{#set: ec number=EC-2.1.3.3}}
+
{{#set: ec number=EC-4.2.1.51}}
−
{{#set: gene associated=Ec-00_004630}}
+
{{#set: gene associated=Ec-27_003130}}
−
{{#set: in pathway=ARGSYN-PWY|PWY-4984|ARGSYNBSUB-PWY|PWY-4981|PWY-7400|CITRULLINE-DEG-PWY|CITRULBIO-PWY}}
+
{{#set: in pathway=PWY-7432|PHESYN}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=aragem}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 19:29, 21 March 2018

Reaction PREPHENATEDEHYDRAT-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • prephenate dehydratase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7432, L-phenylalanine biosynthesis III (cytosolic, plants): PWY-7432
    • 4 reactions found over 4 reactions in the full pathway
  • PHESYN, L-phenylalanine biosynthesis I: PHESYN
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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